Detail



ID : Ahg929898

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929898|scaffold_302355.1
Sequence
GTATGGTTGA TTGGAGTGGC GATGCACCGG CAGGGCTCGT CTCCGATTAC GCCTTCAAGC TATAACGTCG CCGTTTCAAT TGCTTCTGAT GTACCTACTG GCTTAACTAA GTCTCCTTTA TCTCACGCGA TTCCAGTTTC GCCGATTTCT GCTGCTTACC CTTCCGGTGA TCCAATGCTG ATGATGTCTG GGACTCCTCT TGCTAGGGTT CGATTATCTG ATATTTTGCC TTATGAAGGA GCTCCTTCTC CGGTGTATGC AAAAGCCGTG GAGGCTTTGT CTGTGTCTTT GATGAGGTAT AATGCGTCTG TGATCGAAAT AGGGAGCGAT GACACTGCAC TGATGCGATG TGGACTTGAA GCTGCTCGTT TGTATTTTAG AACTAGAAGC CTTAATGTTT CTGGTAAAGG CAATCGTGGC CTCTCTATGT ATAGAGCTGG AAGATCTGTT GAAGATTTAG ATTCTTCACC TCCATGCATG GCTGAGATTT TCCGGTGCTT GGGTAAAGTA GCACGAGCTG CTTTATCTGC AATAGCAAGG CATCTACGTT TAAGAAGCGA TGTTTTTAAC CATATGCTCG ATGACTTTCC ACTAGCTCCG AACGAGGTTT CCTCCTCGGT GCTACTGGCT TCCTATGCTC ATGCATCAAT ACAAAATGGA AAACATGCTT CTGGAGGTGG GAATCTATCT GCTAAAATTG AAGTTGAAAA GGGTTTGTTG ACACTGTTCT GCTCAGATGG CACTGGCATT CAGGTATGTG ACCCAAATGG TCGTTGGTAC ACAGCAGATA ATGGGTGTGG GGTGGGTGAT CTCTTATTGA TTACCGGCAA AGCGCTTAGT CACGCTACTG CAGGTCTCCG TCCAGCTGCC TCTTACAGAA CTACTACCGA TCATTTGTCT GGCACTGACA CTCGCGGAAG GGCATCATTA GCTTTTAGGC TTATGCCGAA AAGTAATGCT ATATTAGATT GTTCCCCAAT AGAAGCAGCC GGCCATGTAA TTCCTCAAAG CTATGTGCCA GTATCTGTTA GTCAGTTTAT GGATAACCTC TTGGCCGAGA ATGACACTCT AGTTAATCCG CCTGTGAAAA CAAATGTTCC GCGGGATGAT GTTTGCAAAG AGCCTTCCTT AAGAAGTGTT CTCTCGGATC CAATTTCTGG GGCTTTTCTT GAAGATGCAA TGGTTGTCTC TTGTGGACAC TCATTTGGTG GCCTCATGCT TAGAAGAGTT CTTGAAATGT CTAGATGTAC GCTCTGCAAT GCAGAAATCG AGTCTGGGTC TCTGGTTCCT AACCATGCAC TTAGGGCTGC CGCTTCAGCT ATAAAGCAAC AGGATGATAA AAGACTTTTC CACAACGCAG CCATGAGGAG GCGTAGAAAA GAAATGAGTG ATCAAATGGA TGTGGAAAAT GGAGATCCAG CTACGGATGA TGGGATGCAT CGAGTGGTGC ATTATCCATT TGCTGTAAAT GAGAAAGTGC TTATCAAGGG AAACCGAAGA ACCCCGGAAA AGTTTGTTGG AAAAGAAGCA ATTGTGACAT CTCAATGTCT CAATGGCTGG TATCTATTAA AGATTGTCGA AAGCGGAGAC AATGTGCGGC TGCAATACCG ATCCCTAAAA AAGATGGTGA ACGATGACAG AGGAGGAGGC CTACAGGTTC AACCGGTTGA GAGCAATAGC TTGTAGAATG TAATCATATT TAACCCTT 
Length1708
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8154800.. 8158614
Download Sequence
A.thaliana
AGI-codeAT3G19895.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.74597 Ahg949816 dentin sialophosphoprotein-related
14.4914 Ahg494224 RGPR-related
15.2971 Ahg492153 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
17.2337 Ahg317751 Major facilitator superfamily protein
18.9737 Ahg479606 Cell differentiation, Rcd1-like protein
23.1517 Ahg475503 GPCR-type G protein 1
23.3452 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
28.8444 Ahg909600 Na+/H+ antiporter 6
29.2404 Ahg488886 PRLI-interacting factor, putative
31.1127 Ahg355148 calmodulin binding;transcription regulators
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression