Detail



ID : Ahg494260

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494260|fgenesh2_kg.8__76__AT5G47180.2
Sequence
TTTTCACACG TGTCACATTT TCCCTCTCTC GCTCTCTTTT TCTCTCTTTC GCTCTCTTCT TCCCCGCACT TCCAGGAGAC GACGCCGGAG GAAAATCGTA CGGAAACTTT CTTTCGACTT CACGAAGCTC TTTCTTTCTC TCTCTTTACC ACCAATCGAA CGAGAGGAGA GAGAGAAGGT GAATTTTGGG GTTATTGGTG GAGAGCGATT ATCGGAAGAG GCAGAGAAAG AAATAAGCAG CTTCTTCCTC CCTCATCGTT GGACCGTGAC TTTTGTTTCC TTCAGGTTTG AGCAAAAAAA AAAAAGATGA CTGGCGTTGG CGAGAATCAG CTTATCTCCA TTCAACCTGA TGAACTCAAA TTTCTCTTTG AACTCGAGAA ACAAAGCTAC TGTGATCTTA AAGTTGCCAA TAAAACAGAG CACTATGTTG CTTTCAAGGT GAAAACAACA TCTCCAAAGA AGTATTTTGT AAGACCTAAC ACTGGTGTCA TTCAGCCATG GGACTCTTGC ATCATTAGAG TTACTCTTCA AGCGCAACGG GAGTATCCTC CAGATATGCA GTGCAAAGAC AAATTTCTTC TGCAAAGTAC CATTGTACCT CCACACACTG ATGTGGATGA ACTTCCACAA GACACTTTCA CCAAGGACAG TGGAAAGACA TTAACAGAAT GTAAGCTCAA AGTCTCTTAT ATTTCCCCGT CTACAACCCA AAGATCCTCT GAATCCGGAG CAACAAATGG TGATGGACAA AGCTCGGAAA CCATCTCTAC TATACAGCGG CTGAAGGAAG AGCGAGATGC AGCCGTTAAG CAAACACAAC AGCTGCAACA TGAATTGGAA ACGGTGAGGA GGCGGAGAAA CCAGAGGAAC AGCGGAAATG GGCTATCCTT GAAGTTGGCA GCTATGGTTG GACTCATCGG ACTCATCATC GGTTTCATCC TAAAACTCAC CTTAGCTTCT CCCACATAAC AACTCTTGAG CTTCTCCGCA TCGCCTACCA TCTCAGTATA TGTAACTGCG GAATCAAAAC AGATTCACAT ATATTTTCGG GTATTTTAAT CTTCTAAATT TGGGCTTATT TCTATCCCTC TCTTTCTTTC TCCTTAATGT TCTACACGTT TCTTCCATCA AATTTTCTTC TTTTTCAGTT ATATTTTATG TACATTTTTG ACCCAACAGA CCCTTTCATC ATTGGATTTA 
Length1200
Protein Sequence
Protein Residue
Map Locationscaffold_8: 324147.. 326769
Download Sequence
A.thaliana
AGI-codeAT5G47180.1
DescriptionPlant VAMP (vesicle-associated membrane protein) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.4164 Ahg915958 Eukaryotic aspartyl protease family protein
27.1293 Ahg472338 squamosa promoter binding protein-like 14
35.0714 Ahg937195 C2H2-like zinc finger protein
40.4969 Ahg472569 Calcium-dependent lipid-binding (CaLB domain) family protein
43.8178 Ahg910443 SCARECROW-like 14
44.587 Ahg935153 multiprotein bridging factor 1A
46.4543 Ahg495055 Xanthine/uracil permease family protein
47.5815 Ahg495857 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
49.7192 Ahg935879 ENTH/ANTH/VHS superfamily protein
49.8899 Ahg497521 Ubiquitin-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression