| Annotation |
|---|
| Description | jgi|Araly1|910443|Al_scaffold_0001_697 |
| Sequence |
ATGGGTTCTT ATCCGGATGG ATCCATGGAC GAGTTCGATT TCAATAAGGA CTTTGATTTG CCTCCCTCAA ACCAAACCTT AGGTTTAGCT AATGGATTCT ATCTAGATGA CTTAGATTTC ACTTCCTTGG ATCCTCCAGA GGCATATCCC TCCCAGAACT ACAACAACAA CAAAGCTGCA TCAGGAGATC TGTTATCATC TCCATCTGAT GACGCTGATT TCTCTGATTC GGTTTTGAAG TACATAAGCC AAGTTCTTAT GGAAGAGGAC ATGGAAGAGA AGCCTTGTAT GTTTCATGAC GCCTTGGCTC TTCAAGCTGC TGAGAAATCT CTCTACGAGG CTCTCGGTGA GAAATACCCT TCTTCTTCTT CTGGTTTTGT GGACCATCCT GAGAGATTGG CTTCTGATAG CCCTGACGGT TCTTGTTCCG GTGGTGCTTT TAGTGATTAC GCTAGCACCA CTACCACTAC TTCTTCTGAT TCACACTGGA GTGTTGATGG TTTGGAGAAT AGACCTTCCT GGTTACATAC ACCTATGCCG AGTAATTTTG TTTTCCAGTC CACTTCTAGG TCCAACAGTG TCACCGGTGG TGGTGGTAAT ACTGCGGTTT ACGGGTCTGG TTTCGGCGAT GATTTGGTTT CGAATATGTT TAATGATAGT GAATTGGCTA TGCAGTTCAA GAGAGGGGTA GAGGAAGCGA GTAAGTTCCT TCCTAAATCT TCTCAGCTCT TTATTGATGT GGATAGTTAC ATCCCTAAGA ATTCGGGTTC CAAGGAAAAT GGTTCTGAGG TTTTTGTTAA GACGGAGAAG AAAGATGAGA CAGAGCATCA TCATAGCTCT GCTCCTCCTC CCAACAGATT GACTGGGAAG AAAAGCCATT GGCGCGAAGA AGATGAAGAT TTCGTCGAAG AAAGAAGTAA CAAGCAATCA GCTGTTTATG TTGAGGAAAG CGAGCTTTCT GAAATGTTTG ATAAGATCTT GGTATGTGGC CCTGGGAAAC CCGTATGCAT TCTTAACCAG AAGTTTCCAA CAGAACCCGC CGAAGTCGAG ACCGCACAGT CAAATGGAGC AAAGATTCGT GGGAAGAAAT CAACTACTAG TAATCATAGT AATGACTCTA AGAAAGAAAC TGCTGATTTG AGGACTCTTC TGGTGTTATG TGCACAAGCT GTATCAGTGG ATGATCGTAG AACTGCCAAT GAAATGCTGA GACAGATACG GGAGCATTCT TCGCCTCTAG GCAATGGGTC AGAGCGATTG GCTCATTATT TTGCAAATAG TCTTGAAGCA CGCTTAGCTG GGACTGGTAC ACAGATCTAC ACCGCTTTAT CTTCGAAGAA AACATCTGCA GCAGACATGT TGAAGGCTTA CCAGACATAC ATGTCGGTCT GTCCGTTCAA GAAAGCTGCT ATCATATTTG CTAACCACAA CATGATGCGT TTCACTGCAA ACGCCAACAC GATCCACATA ATAGATTTCG GGATATCTTA CGGTTTTCAG TGGCCTGCTC TGATTCATCG CCTCTCGCTC AGACCTGGTG GGTCGCCTAA GCTTCGCATT ACTGGCATAG AGCTTCCTCA GCGTGGTTTT AGACCAGCGG AAGGAGTTCA GGAGACGGGT CATCGTTTGG CTCGATACTG TCAGCGACAC AATGTTCCGT TTGAGTACAA CGCAATTGCT CAGAAATGGG AAACGATCAA AGTCGAAGAT TTAAAGCTTC GACAAGGAGA GTATGTGGTT GTAAACTCTT TGTTCCGTTT TAGGAACCTT CTAGATGAGA CCGTTCTGGT AAACAGCCCG AGAGATGCGG TTTTGAAACT GATAAGAAAA GTAAACCCGA ATGTCTTCAT CCCTGCGATC CTAAGCGGGA ATTACAACGC GCCATTTTTT GTCACGAGGT TCAGAGAAGC GTTGTTTCAT TACTCGGCTG TGTTTGATTT GTGTGACTCG AAGCTAGCAA GGGAAGACGA GATGAGGCTG ATGTATGAGA AAGAGTTTTA TGGGAGAGAG ATTATTAATG TTGTGGCTTG TGAAGGAACG GAGAGAGTGG AGAGACCAGA GACATATAAG CAGTGGCAGG CGAGACTGAT CCGAGCCGGA TTTAGACAGC TTCCGCTTGA GAAGGAACTG ATGCAGAATC TGAAGTTGAA AATCAAAAAC GGGTACGATA AAAACTTCGA TGTTGATCAA AACGGTAACT GGTTGCTTCA AGGGTGGAAA GGTAGAATCG TATGTAAGCA ATGTTGTCTC GAGTTCTCAT CTGATTCAGA TTTCGTTGCT GAATCTTTTG TAAAGTTTTC TTCTTCGAAA GAGGAACCAA ATTCAGGGTT TTATAGGAAA AAAAGGAGTT TTTTTTTTTG GATGATGGAA TCGAATTACT CAGGTTTGGT CAACGGTTTA GAGTATTACG ATGTGAGCTT CTTACCAAAT TCGATTCCTG ATCTTGGATT CGGTGTTCCT TCGTCTAGTG ATTTTGATCT CCGCATGGAT CATCAACCGT CAATTTGGGT TCCAGATCAA GACCATCACT TTTCTCCTCC AGCTGATGAG ATTGATTCTG AAAACACACT TTTGAAATAT GTAAACCTTC TCCTTATGGA AGAGAGTCTC GCGGAGAAGC AATCTATGTT CTACGATTCC TTGGCTCTTC GACAAACCGA AGAAATGTTG CAGCAAGTCA TCAGCGACTC GCAAACTCAC TCTTTTATTC CTAATAATTC GATTTCTACT ACTAGTACTA GTAGTAATAG TGGCGATTAT TATAGGAGCA GTAGTAACAG CAGCAATTCT AGTGTACGCG TCGAAACAGC TGCTAATTCT GCTGAGAATG AAGTGTTGTT GTATGATAAT CATCTTGGTG ATTCTGGTGT TGTGTCGTTT CCAGGGTTTA ACATGTTGCG TGGAGGCGAG CAATTCCGAC AGCCGGCGAA TGAGATTCTT GTCAGGAGTA TGTTTAGTGA TGCAGAATCA GTTATGCAGT TTAAGAGAGG GCTAGAGGAA GCTAGCAAGT TTCTTCCTAA TACTGATCAA TGGATCTTCA ATCTTGAGCC TGAGATGGAG AGAGTTGTTC CGGTGAAACA AGAGAAAGGA TGGTCTGGTA TCTCGAGAAC TAGGAAGAAT CATCACGAAC GGGAAGAAGA AGATGATCTA GAGGAAGCTA GGAGTAGTAA GCAATTTGCA GTGGATGAGG AAGATGGGAA ATTGACAGAA ATGTTTGATA AGGTTTTGCT TCTTGATGGT GAATATGATC CGCTGATTAT CGAAGATGGC GAGAATGGTT CAAGCAAGGC TCAGGTTAAG AAAGGCCGGG GGAAAAAGAA AAGTCGAGCG GTTGATTTCC GCACACTTCT CACTCTATGC GCACAATCTG TTTCTGCAGG GGATAAGATT ACGGCTGATG ATTTGCTGAG GCAGATAAGG AAGCAATGTT CACCGGTTGG TGATGCATCA CAGAGACTAG CTCATTTCTT CGCCAATGCA CTTGAGGCGC GTCTTGAAGG TAGCACGGGA ACTGTGATCC AGAGTTACTA CGATTCCATT TCCTCCAAGA AACGAACAGC TGCACAGATT CTTAAATCCT ATAGTGTGTT CTTGTCTGCG TCTCCGTTTA TGACTTTGAT CTATTTCTTC TCCAACAAGA TGATTTTTGA TGCTGCCAAG GGTGCTTCGG TTCTTCATAT AATTGATTTC GGGATCCTTT ACGGTTTCCA GTGGCCGATG TTTATACAGC ACTTATCAAA GACCAACACC GGACTACGGA AACTACGGAT TACCGGCATC GAGATTCCTC AACACGGGCT TCGTCCAACC GAAAGAATAC AGGATACAGG TCGAAGACTG ACAGAGTATT GCAAACGGTT TGGAGTTCCA TTCGAATACA ATGCAATTGC GTCTAAGAAT TGGGAAACAA TCCGGATGGA GGAGTTCAAG ATCCGACCAA ACGAAGTTCT TGCGGTTAAT GCTGCGCTTC GATTCAAGAA TCTCCGAGAC GTTATTCCAG GCGAAGAGGA TTGCCCGAGG GACGGATTTC TAAAACTGAT CAGAGACATG AACCCTAACG TCTTCCTCAG TTCGACAGTT AACGGATCTT TCAACGCTCC GTTCTTCACC ACACGGTTCA AAGAAGCTCT GTTTCACTAC TCGGCGCTCT TTGACTTGTT TGGTGCGACT CTGTCCAAAG AAAACCCGGA GAGGATACAT TTCGAAGGGG AGTTTTATGG GAGAGAAGTG ATGAATGTGA TAGCGTGTGA AGGAGTAGAT AGAGTGGAGA GACCGGAGAC TTACAAGCAA TGGCAAGTGA GGATGATTAG GGCTGGATTT AAACAAAAGC CTGTGGAGGC AGAGCTTGTG CAGTTGTTTA GGGAGAAGAT GAAGAAATGG GGTTATCACA AAGACTTTGT CCTTGATGAA GATAGTAATT GGTTCTTACA AGGTTGGAAA GGTCGCATCC TCTTCTCTTC TTCTTGTTGG GTCCCTTCTT AG |
| Length | 4482 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 2591553.. 2598689 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G07530.1 |
| Description | SCARECROW-like 14 |
| TAIR curator summary | Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. |
| Alias | [ATGRAS2][GRAS2][SCL14][ARABIDOPSIS THALIANA GRAS (GAI, RGA, SCR) 2][GRAS (GAI, RGA, SCR) 2][SCARECROW-like 14] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg919087 | multidrug resistance-associated protein 5 |
| 5.19615 |
Ahg488935 | sucrose phosphate synthase 1F |
| 6.7082 |
Ahg895977 | RNA polymerase II transcription mediators |
| 8 |
Ahg316204 | |
| 9.79796 |
Ahg480601 | ubiquitin family protein |
| 10.9545 |
Ahg491060 | RNA polymerase II large subunit |
| 11.4891 |
Ahg477878 | Protein kinase superfamily protein |
| 13.5647 |
Ahg480637 | Endoribonuclease/protein kinase IRE1-like |
| 13.8564 |
Ahg483963 | multidrug resistance-associated protein 4 |
| 14.4914 |
Ahg493344 | Bax inhibitor-1 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|