| Annotation |
|---|
| Description | jgi|Araly1|494332|fgenesh2_kg.8__148__AT5G46400.1 |
| Sequence |
ATGGTGACGA CGGAGGTTAG GACCGCCGTC TCCGATAAGG AACCATTGCC ACCGTCTCCA CAATTAGACG GATCTAGTGA TTTCCTCGAC AACGATAGAT TACAAGAAAC TTTCTCCAGT GGAGCTCTTG ATTTTGATGA ATGGATTTTG TTAATCTCCG AAATAGAGAC TTCGTTCCCC GATGATATTG AGAAGTTATG TTTAGTTTAC GATGCTTTCT TGTTGGAGTT TCCATTGTGC CATGGCTATT GGAGGAAATA TGCTTACCAT AAAATAAAGT TATGCACTTC AGAAGATGCT CTTGAAGTTT TCGAACGAGC AGTACAAGCA GCTACTTATT CTGTAGCTGT ATGGCTCGAC TATTGCGCTT TCGCTGTTGC TGCTTATGAA GATCCTCATG ATGTTAGTAG ATCATTTGAG AGGGGGCTTT CATTTGTTGG AAAAGATTAT TCTTGCTGCA ATCTTTGGGA CAAATATATA GAATATCTTA TGGGGCAGCA GCAATGGAGT TCATTGGCTC ATTTATATCT CCGGACCCTG AGATATCCAT CCAAAAAGTT GGATCTCTAT TACAAAAACT TCAGGAAGAT TGTGGCTTCT TTGAAAGAGA AGATTAAATG TAGAATAGAT GTTAACGGAG ACCTTTCTTC AGACCCCATG GAAGAAGATT TGGTCCTTAC ACGTCACACT GATGAGGAGA TCTCTGTTGT TGTAAGAGAC TTGATGGGTC CTTCCTCTAG CTCAGCTGTG TCAAAAGCAC TGCATGCATA TTGGTCAATT GGAGAACAGT TCTACCAAGA CTCACAGCAG TTGATGGAGA AAATAAGCTG CTTTGAGACA CAAATCCGCA GGCCTTATTT TCATGTAAAT CCGTTGGACA CTAATCAGCT CGACAATTGG CATGCATATT TGAGCTTCGC CGAAACATAT GGGGACTTTG ATTGGGCTAT TCATCTCTAT GAGAGATGCT TAATACCATG CGCTAATTAC ACCGAGTTCT GGTTCCGCTA TGTGGATTTT GTAGAAAGCA AGGGTGGAAG GGAGCTAGCA AACTTTGCAT TGGCTCGAGC ATCACAAACT TTTGTCAAGA ATGCATCTGT TATCCATCTA TTCAATGCAA GATTCAAGGA ACACGTTGGA GATGCATCTG CTGCTTCAGT TGCTCTGTCT CGATGTGGTG AGGAACTTGG TTTTGTTTTG GTTGAAAATG TAACTAAGAA GGCTAACATG GAAAAGCGCC TGGGTAATTT TGAAGGTGCT GTTACTACGT ACAGAGAGGC TCTGAATAAA ACGCTCATTG GAAAAGAAAA TTTGGAAACC ACCGCCTTGC TGTATGTTCA ATTTTCTCGC CTCAAGTACA TGATTACAAA TAGTGCTGAT GATGCAGCTC AGATTCTGAT AGAAGGCAAT GAGAAAGTTC CTCACTGCAA ATTACTTCTT GAGGAACTTA TAAGACTCTT GATGATGCAT GGAGGGTCTC GACGAGTGGA TTTGTTAGAT CCTATCATAG GTAAGGAAAT ATCTCACCAG GCAGATTCCT CCGATGGTCT GAGCGCAGAG GACAAAGAAG AGATATCAAA TTTATACATG GAGTTTATTG ATCTCTCTGG AACCATCCAT GATGTGAGGA AGGCTTTGGG TCGACACATA AAATTATTCC CCCATTCTGC TAGAGCCAAG TTACATGGGT CCCGTCCTTC AGGAAATTCA TTTAGAGAGT TGATTCAGAG AAGAGAGAAG ACTCGTGACT GCTTGAATCA GGACCTCTTA ACAAACAAAG GCATTAGCAG CACAGTCGAT TCGACACCAA AAGAAAAGAA AGAGTCATCT CTAGACCCTG ATGGTGCCCA ATCTAAAGAT GCTGTTCGGG CTGACTATGT AAACACTGAG CCTAATCGGG GGTGTCTGGC TTCAGGACAT CTAGTTGAAA GAAAGGATAA TGTTGCTGAG AGGGAGGATT TGTGGGAGTC ACAGAGAGAT CTGTCCATGG GATTAAAAGC TGATGAAGGT GGTGGACGCT CTCGTGAAGT TAGCCTACCA ATCCAAGCCA CACCAAAACA TGGTTTTGTC ACTAAACAAG CTTACTTCTC GTCCAGTTCT GTAGATACTG TGAAAACAGA TGCTATAGTG ATCCAACCTA GTGGCTCACG GAGTCCCCAA AGTTACCAAA GCCAAGAGTC TCTCAGGCAA ACTGGTCGGA GCAGGTACCC TAGAAGAGAT TTAAACCAGA CTCATAGAGA TTCGAAACCT CGTTCTCGAG AGAGACCTCC TCAGATGTCG TATTCTCCAG TCGGAACTGG TCGTGAAATT CCCGGTCAGC ACATGGAAGT TGCTCCTCGA GACAATCGAG CAGCGCTACA AAGCTCAATC TCACAGAATC CGCAAAACCA ATTTCACAAC TCTGCACTTC AGATGCATCC TGTGGTTCAA ACATTCAATG CTTATCCTCA AACTCAGATA CTTGGTCAGC ACATGATTGT ATCGCCTCCA GACTCACAGA ATCTGCAGAA CCAATATCAA AACTCTACAT CTCAGGTTCA AACCTCCTTT GCCTATCCTC AAACTCAGAT TCCTCAGAAT CCAGTGCAAA GTAACTACCA ACAAGAAGGT CAGATGCAGA GTCATGAAGC TTATAACCAG ATGTGGCAAC AGTATTATTA TAGCTATTAT TACTATCAGC AACACCAACA GCTTATGTCT GAACAGCCAC AACCAAATCA GAACCCTCAG CCACAACTAG ATCAGAATCT TCTGCAACTT CTCTCCAAAC AGTACCAATC TCAAGCCAGT ACTCAGTATC CACAACCTCA ACAGGTGAAG GAACAGCTCA ATACACAGCA ACAGAGCCAA GAACCAGAAA ATCAGCAGCA AATTCAGTTC CAGCAACAAC AACAAGAATG GTTCCAACAG CAACAATGGC AACAACAACA GTATTTTCTC TATCTTCAAC AACAGCAGTT GCAAGGAGAA GCAAAAGGCG ATGAACAAAG ACCCTCTATG CCACAGCCAC AGGTCTCCAC AACAAACAGT GATGTTCAAA AGAGTCAAGA ATCTGGAGCA GTCAATGAAG CAAATCTATC TTCTGACACT TCCATCAGTT CTATATGAAT CTCATGAAAG CCGATGGACA CGTAACTGAT TGTGTTATTA AAAAATGTTC CAAAAATTTC AATTTTAGTT TGGTTTTCAA TCCAAGTTTA GCATTCAATT AATTTT |
| Length | 3216 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 997235.. 1001786 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G46400.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | |
| Alias | [AT PRP39-2][PRP39-2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.0995 |
Ahg486363 | ARM repeat superfamily protein |
| 18.8149 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 25.3377 |
Ahg472969 | U2 snRNP auxiliary factor small subunit, putative |
| 30.4631 |
Ahg933578 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 30.7246 |
Ahg907461 | 3'-5'-exoribonuclease family protein |
| 33.6898 |
Ahg489516 | Uncharacterized protein |
| 34.9857 |
Ahg341309 | Sterile alpha motif (SAM) domain-containing protein |
| 36.2077 |
Ahg488891 | Domain of unknown function (DUF1767) |
| 40.8167 |
Ahg481885 | anthranilate synthase 2 |
| 41.1704 |
Ahg482042 | Peptidase S24/S26A/S26B/S26C family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|