Detail



ID : Ahg494398

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494398|fgenesh2_kg.8__214__AT5G45840.1
Sequence
ATGGGTTGTC GATGGAATCC AATTGGGTTC CAATTCTCTT GCTTTATGTT CTTGATCATT ACCCTTCAAT CTCGGTCCTC GTTATCCCTC GAATCCGAAG GATACATATT GTTGAAATTC CGGGAAAGAG TTGATTCTGA TCCTCATGGA ACTCTTGCAA ATTGGAATGT TTCTGATCAT GATCATTTGT GTTCTTGGTT TGGTGTTACG TGTGTCGACA ATAAAGTGAA GATGCTGAAT CTTAGTGGTT GTTCTTTGGG AGGAACTTTA GCTCCTGAGC TTAGTCAATT GAGTGAATTA AGATCGCTAA TACTATCCAA GAACAAACTC TCTGGTGACA TTCCAAAGGA ATTTGCGAAT TTCGCAAAGC TAGAGTTCTT GGATTTGCGA GATAATAAGT TAAGCGGAGT AGTTCCACCC GAGCTAAACA AAGTGTTGAC ACCGGAAAAC TTGATGCTTT CTGGTAACAA ATTTGCGGGT TTTATGGCCA TAAAGTTCCT GAAACTTCAA TCGCTATATA AAGTCCAGTT GAACAAGAAC CGGGAGCTGT CTTCGGTTTC CGCTGATGTC CTTGACTGTG TAAATAGAAA ACTTGGATAC TGGGTCCGAA GGGAATCTCA CGGCGAGAAT TATGTCGTGA ATTATCACCC AAGTTATTCA GGGAACAAAA CTAGTATCTT CAAAAGGCGT GAGTTACTCG AGGGAACAAG CAATTTAGCG GCTATGCCGG CGCCTGATGC GCCTAGTCCT TCTCCTGAGA TTGTAACCAG AGTGTTTCCT CGAAGCAGCG GGTCTTTTCC CGCATTAACT AATGCAAAGA AGAGAATACC ACCATTGATC TCTCCTTCTT CTCCTTCTCC GCCTACCAAC AACACCATCG CTAATGATCC ACCGAGGAAA TTCGAAGAAA AATCGAAAGG GTTTAAGGAC GTTTGGTTGT ATGTTGTTAT TGGTGTTGCT GCTTTCATAG CGATGCTGAT AATTGTAGCG GTTATATTCT TCTTCCGGAA AAGAGCTGTG AAGAGTATAG GTCCATGGAA GACTGGTTTG AGTGGACAAT TGCAGAAAGC TTTTGTTACT GGTGTACCTA AGCTAAACCT GTCTGAACTA GAAACAGCCT GTGAAGATTT CAGTAATATC ATTGAAGCAT TTGATGGTTA CACTGTCTAT AAAGGAACTT TGTCAAGTGG CGTTGAGATT GCGGTTGCTT CAACCGCGAT TTTGGAAACT AGAGAATGGA CAAGAGCTAT GGAAATGACT TACCGCAGAA GGATTGATAC AATGTCAAGA GTCAACCATA AGAACTTTGT GAATCTAATT GGATATTGCG AAGAAGATGA ACCGTTTAAT AGGATGATGG TTTTCGAATA TGCTCCAAAT GGAACTCTTT TCGAACATTT GCACGATAAG GAAATGGAAC ATCTTGATTG GAACGCGAGG ATGAGGATAA TAATGGGAAC TGCTTATTGT CTGCAATATA TGCACGAGCT TAATCCGCCA ATCTCACACA CTAAACTTGT CTCATCAGCA ATCTACTTAA CAGATGATTA CGCAGCAAAG GTCGGAGAGG TTCCTTTCAG CGGACAAACC GGGAGTAAAC CGAGAAAACC GATGAGCGGT GATTTAGACC AATCTTTATT GCCATTACCA CCTGAACCAG AGACTAATGT CTATAGCTTT GGAGTATTAA TGCTTGAGAT AATCTCTGGA AAGCTCTCAG ATTCAGAAGA AGAAGGATCA ATTCTAAAAT GGGCATCAAA GTATCTGGAG AATGATAATT TGAGAGATAT GATTGATCCT ACACTAACAA CGTTTAAAGA AGAAGAACTT GAAGCTATAT GTGACGTGGC AAGACACTGT CTGAAACTTG ACGAAAGCCA AAGACCAAAA ATGAAAGATG TGATCGAACA ATTGAAAGAA GTAATAAACA TATCTCAAGA ACAAGCAACA CCAAGACTCT CTCCTCTTTG GTGGGCAGAG CTTGAGATCT TATCCTCTGA AGCTACATAA 
Length2010
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1342189.. 1345337
Download Sequence
A.thaliana
AGI-codeAT5G45840.2
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
31.8748 Ahg323966
50.3587 Ahg351608 Protein of Unknown Function (DUF239)
58.9661 Ahg950383 Auxin efflux carrier family protein
71.6938 Ahg919859 P-glycoprotein 10
72.6911 Ahg316947 Pectin lyase-like superfamily protein
83.9643 Ahg890287 Protein of unknown function (DUF1264)
84.7585 Ahg486550 Protein of unknown function (DUF1442)
95.5406 Ahg481664 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression