Detail



ID : Ahg494466

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494466|fgenesh2_kg.8__282__AT5G45130.1
Sequence
TTTTTTTGCT TTCGTCTTCG GGAGAGAGAG AGAGAGAGAG AGAAATTTGG TTGTTTGTTG ACGAAGCTTC TTCGGTCTCT CTTCTCCGTC TTTCGATTGT CAACGCGGCT TTCATCTTCA ATTTTCTTTC TATTTTAGCA GAACATTCTC CAGCTTCAAA TACTGTATCA TCCGATCAAT CAATCATCAT GGCTAGCTCT GGAAACAAGA ACATCAACGC CAAATTGGTG TTACTAGGAG ATGTTGGGGC TGGAAAATCA AGTCTTGTGC TGCGTTTTGT TAAAGATCAG TTTGTTGAAT TCCAGGAATC AACCATAGGT GCAGCTTTTT TCTCTCAAAC ATTGGCTGTG AATGATGCGA CTGTGAAGTT TGAGATATGG GATACAGCTG GTCAGGAACG GTACCATAGC TTGGCTCCAA TGTACTACAG GGGTGCAGCT GCTGCTATTA TTGTCTTTGA CATTACAAAT CAAGCGTCAT TTGAGAGGGC GAAGAAATGG GTTCAAGAAC TGCAGGCACA AGGTAACCCT AATATGGTGA TGGCTCTTGC TGGAAACAAA GCTGATTTAT TAGATGCAAG GAAGGTGTCT GCAGAGGAGG CAGAGATATA TGCTCAAGAG AACAGCCTTT TCTTCATGGA AACCTCAGCG AAGACCGCAA CAAATGTCAA AGACATATTC TACGAAATCG CGAAAAGGCT ACCGCGTGTA CAGCCAGCTG AAAACCCAAC AGGAATGGTT CTCCCAAACG GGCCAGGGGC TACAGCAGTG AGTTCATCGT GTTGTGCTTA GTTTCGTACC TTAAGAGAGA TCTCTTTTGG TTAGTCGCAT AGTAGAGAAC ATCGAGACTT TATGTGTTTG CTTCGTCTTT GTTACTTTAC TTTTCTTGCA TTGACAACAA CAACAGTGTA TATCATGATG ATACTTCTGC CTTTGTGGAA TATGAAGATA TTTGTATTTG GAGAGATTTA TTTGGATCTC TTTTGTAATT AGATATCATA ACTTAGTGTC AAAAAAGAAA AATGTGCTTC CATCTTTCGT TTATGTTTTA AGTGAATGCT CAGAGTTA 
Length1068
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2304081.. 2306097
Download Sequence
A.thaliana
AGI-codeAT5G45130.1
DescriptionRAB homolog 1
TAIR curator summarysmall GTP binding protein
Alias[ATRAB-F2A][ATRAB5A][ATRABF2A][RAB-F2A][RAB5A][RABF2A][RHA1][ARABIDOPSIS RAB HOMOLOG F2A][RAB HOMOLOG F2A][RAB homolog 1]
Gene coexpression
MR
MR Locus Description
6 Ahg495379 spermidine synthase 3
10.247 Ahg473749 basic region/leucine zipper motif 60
22.9783 Ahg475854 aldehyde dehydrogenase 3H1
26.3818 Ahg333392 hydroxyproline-rich glycoprotein family protein
26.3818 Ahg901830 hydroxyproline-rich glycoprotein family protein
26.8328 Ahg480216 oxophytodienoate-reductase 3
28.9828 Ahg932042 ER lumen protein retaining receptor family protein
29.3428 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
34.5977 Ahg941199 Zinc-binding dehydrogenase family protein
37.1483 Ahg493373 SET domain protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression