| Annotation |
|---|
| Description | jgi|Araly1|495379|fgenesh2_kg.8__1195__AT5G53120.1 |
| Sequence |
AAACAAATAG AGACCTTTGA GAGAAGTGAG AAACGCAACA ACAACACCGA AAGAGAGAGT CCAAATTCGA AAGAGAAAGA ATCAAATTCC TTCTTCTTCC TTTTTTTGTT TTTCAATTAC TACTTTAATC TTCTTTCCCG CTCACTATTC TTCTTCCCGT TTACGACCAG TATACAGAGG CTGGAGCTGG AGAAGAAAAG GATTGTCTAT GGAGGGAGAC GTCGGAAAAG GTTTGGTATG CCCGAAGACT ATGGATGGGA AGGCGAGTAA TGGGAATGGT TTAGAGAAGA CTGTACCTTC TTGTTGCCTT AAGGCTTTGG CATGTGTACC AGAGGATGAT GCTAAGTGCC ACTCCACTGT TGTTTCTGGG TGGTTCTCGG AACCTCACCC TCGCTCTGGG AAAAGAGGCG GCAAATCAGT CTATTTCAAC AACCCTATGT GGCCAGGAGA AGCACACTCA CTGAAAGTTG AGAAAGTTCT GTTCAAAGAC AATTCAGATT TTCAGGAGGT CCTAGTGTTC GAGTCAGCCA CGTACGGAAA GGTGCTTGTT CTAGATGGTA TTGTACAGCT GACTGAGAAA GATGAATGTG CATATCAGGA GATGATAGCC CATCTGCCTT TATGCTCTAT ATCTTCGCCT AAAAATGTTC TTGTTGTTGG TGGAGGTGAT GGTGGTGTTC TTCGAGAGAT TTCTCGCCAT AGTTCTGTTG AGGTTATTGA TATCTGTGAG ATAGACAAGA TGGTTATAGA TGTGTCTAAG AAGTTCTTCC CCGAGTTAGC GGTTGGATTT GAGGATCCTC GTGTTCAACT TCACATTGGT GATGCTGCTG AGTTCCTCCG TAAATCCCCT GAAGGGAAGT ATGATGCCAT CATTGTTGAT TCTTCAGATC CTGTTGGTCC TGCTCTAGCG CTTGTTGAGA AGCCCTTCTT CGAAACACTG GCAAGAGCAT TGAAGCCTGG GGGAATTCTT TGTAACATGG CGGAAAGTAT GTGGCTCCAT ACTCATCTTA TTGAAGATAT GATCTCCATT TGCCATCAAA CATTCAAAAG TGTTCACTAT GCGTGGAGCA GCGTCCCCAC ATATCCAAGC GGGGTGATTG GTTTCGTCTT GTGCTCTACC GAAGGACCAG CTGTTGATTT CAAGAACCCA ATCAACCCAA TTGAGAAACT AGAGGGTGCG ATGACCCATA AAAGAGAATT GAAGTTTTAT AACTCTGATA TGCACAGAGC AGCGTTCGCT TTGCCCACAT TCTTGCAGAG AGAAGTGGCT TCACTTCTGG CTTCTTGACT TCTGTTTGGC TCTACCTTAT CCATCATGTC GAACTTTTGT AGAACTGTTG ACGAGGAATA ATAAATCATT GGAGGCTTTG TATCCCTAAG CTTACTCCTT TATAAAAAGA CTTCTATTTA TATAT |
| Length | 1415 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14582283.. 14585570 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53120.6 |
| Description | spermidine synthase 3 |
| TAIR curator summary | encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency. |
| Alias | [ATSPDS3][SPDS3][SPMS][SPERMIDINE SYNTHASE 3][spermidine synthase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg494466 | RAB homolog 1 |
| 8.3666 |
Ahg473749 | basic region/leucine zipper motif 60 |
| 10.7703 |
Ahg496034 | highly ABA-induced PP2C gene 1 |
| 12 |
Ahg494266 | BAX inhibitor 1 |
| 15.0997 |
Ahg939699 | |
| 17.8885 |
Ahg488204 | pheophytinase |
| 18.3303 |
Ahg487142 | Pyridine nucleotide-disulphide oxidoreductase family protein |
| 19.2094 |
Ahg475826 | Major facilitator superfamily protein |
| 19.3649 |
Ahg493199 | acyl-CoA oxidase 1 |
| 19.4422 |
Ahg938176 | vacuolar sorting receptor homolog 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|