Detail



ID : Ahg494605

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494605|fgenesh2_kg.8__421__AT5G43950.1
Sequence
TGGTTTCGCG AAGCATCGGA TGATCTCAGA GACACAGAGG GAATGTTTGG ATGCAAATGT CTGTATTGGA ACAATCTCAG AGAATTACCT CCATTGAAGG AACCTGAAAC CTTCTCTCTC CCTGCTTCTA TTCCCCAGTG GCCTTCAGGT CAAGGCTTTG GTTCAGGAAG AATCAATCTT GGTGATTTAG AACTCGCCGA GGTCACAAGT TTTGAATTTG TATGGCGATA CTGCTCTCGT CGAGACAACA AGAAGAGTGT TTCCTTCTAC AAACCGGACA AATTACTCGA AGATTTCCAT TGTTTAGGTC ATTACTGTCA GTCTGATTCT CATCTCTTGA GAGGTTTCCT TCTTGTAGCA AGACAAGTTA ATAAGTCTTC AGAGCCTGCA CTTGTGCAAC CACTTGATTA TACATTGGTC TGGAGCTCAA ATGACTTATC AGAAGGATCT CAAAGCGGTT ACTTCTGGCT ACCGCAGCCT CCTCAAGGGT ATAAAACGAT CGGATTTTTG GTTACAACGA GTCCCTCGAA ACCAGAATTG GATCAAGTTA GATGCGTTCG AGCTGATCTA ACCGATAAAT GTGAAGCACA TAAAGTCATC ATCACTGCTA TATCGAATTC TTTAAGCATT CCTTTGTTTA TATGGCAAAC AAGACCTTCC GACCGCGGAA TGTGGGGCAA AGGAGTCCCA ACAGGTACAT TCTTCTGCAC AACTCAATCC CCTGAAGAAG ATCATCTCAG TACAATCGCG TGTCTAAAAA ACCTCGATTC GAGTTTACAC GCAATGCCAA ACATTGATCA AATCCATGCT TTGATTCAAC ACTATGGTCC AAGAGTTTAC TTCCATCCTA ATGAAGTCTA TCTATCTTCT TCCGTCTCAT GGTTCTTCAA AAACGGTGCA GTCTTATGCA GCAACTCAAA TTCCTCTGAT ATCAATGAAC CCATAGACGA AACCGGCTCG AATCTACCTC ATGGCGGAAC CAACGATAAG CGATATTGGA TCGATTTACC GATAAACGAT CAACAAAGAC GCGAATTCCT CAAACGAGGC AATCTCGAAA GCTCGAAGCT TTACGTTCAC GTTAAGCCAG CATTTGGAGG AACGTTCACT GATCTTGCGT TTTGGATTTT TTGTCCGTTC AACGGACCAG CGACTCTGAA ACTAGGGCTC ATGAATCTCT CGTTAGCTAA AACTGGTCAA CATGTTTGTG ATTGGGAACA TTTCACACTC AGAATCAGCA ATTTCTCCGG CGAGCTTTAC TCGATTTACT TCTCACAACA CAGTGGCGGC GAATGGATCA AACCTCAAGA TCTTGAGTTC GTTGAAGGAA GTAACAAAGC TGTGGTTTAC TCGTCGAAGC ATGGTCACGC GAGCTTTTCT AAGTCTGGAT TGTATTTACA AGGATCTGAT TTGCTTGGAA TTGGGATAAG GAATGATACA GCGAGAAGCG ATTTGTTTGT TGATTCGAGT TTGAGGTATG AGATTGTGGC GGCGGAGTAT CTTGGAGGTG CGGTGGTGGA ACCGCCGTGG TTAGGTTATA TGAGAGAGTG GGGACCGAAG ATTGTGTATA ATTCGAGAAC GGAGATTGAG AAGTTGAATG AAAGATTGCC ATGGAGGATG AGAACTTGGG TTGATGCTGT GTTGAGGAAG ATTCCGGTGG AATTATCCGG CGAGGAAGGA CCGACGGGAC CAAAGGAGAA GAATAATTGG TTTGGTGATG AGAGATGGTG ATATTTTTGT AATGGGCTTG AGATATTTGA TATATGGGCC TGGAATATTT TATTTCTCAG GCCCATAACT TAGTGACACA GCAAAACCTA TTCGTGTGTC CTACAGTTCT TCTCTTCGCT ATATGATTCG TGATTCAGTG AAGTGATTAA TGATGCTTTC GGTCTTAA 
Length1898
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3558107.. 3560134
Download Sequence
A.thaliana
AGI-codeAT5G43950.1
DescriptionPlant protein of unknown function (DUF946)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.3303 Ahg497537 pyridoxine biosynthesis 1.2
20.0998 Ahg946375 glycine-rich cell wall protein-related
24.4131 Ahg487773 mitochondrial HSO70 2
24.6171 Ahg475028 Cystatin/monellin superfamily protein
25.9037 Ahg909999 GTP binding Elongation factor Tu family protein
29.8329 Ahg492313 mitochondrion-localized small heat shock protein 23.6
34.1467 Ahg477841 Subunits of heterodimeric actin filament capping protein Capz superfamily
41.7133 Ahg315321 beta glucosidase 4
51.2055 Ahg486764 galacturonosyltransferase-like 7
52.1249 Ahg477608 beta glucosidase 25
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression