Detail



ID : Ahg486764

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486764|fgenesh2_kg.5__2756__AT3G62660.1
Sequence
GACAAAATGA ATAGAGATAA TATATAAACA CAAGCATTAG GCTCTGTCGA GAAAACATAA ATTTTCTATG ATTAGGCCAT ACAAATAAAT CTGTTTGTTG GCTTTGGAGA AATCCAAGGA ATTAGTCCTT TTACCCATTT TTCTCTCTCT CTCTGGCTTC TTCTTCTTCT TCTTCCTATC AAATCACCAT CTTCTCTATA TTACTAAAAT AGAGAGCCAA AGACATAAAA AGAGAGGAGA GGGCGTAAAA CAGCAGACGG TGGCGCACCG TAGCACCGCC CCCTCCTAAC CTGCGCCTCT CTTCTTCTCT TTCATTTTTT TTTTCCGGTT TCAGGAATTA TTCCTCTCCT CCTCTCTCAG GTCGCTTCGA TCCCAAGGCA AATAGTTTTC TGATTTTCCG ATTCTTACCT TCAATTTTGC ATTTTTTCTT CTTCTTCTTC TTCAGATGCA TTCACCTACA AAACTCTGGC GGACATCAAA GGAACCCTAG CTTTTCTCCG GTCTTATATC GCCTCTATCG CCGCCGATCG GTGGTTTGAT TTCAAATCCA AGAAGAAGAA ACGCAGAGGT TCGATTCGTA GTCGTCTCAG GATGCTTTGG ATCATGAGAT TCTCCGGTTT ATTCTCCGCC GCTTTGGTTA TCATCGTCCT CTCTCCTTCT CTCCAATCGT TTCCTCCAGC TGAAGCTATC AGATCCTCTC ATCTCGACGC TTACCTCCGA TTTCCCTCCT CCGATCCACC GCCGCATAGA TTCTCCTTCA GAAAAGCTCC TGTTTTCCGC AATGCCGCCG ATTGCGCCGC CGCAGATGTC GATTCCGGCG TCTGTAACCC TTCCTTGGTC CACGTCGCGA TTACTCTGGA TTTCGAGTAC CTACGTGGCT CAATCGCCGC CGTTCATTCG ATTCTCAAGC ATTCGTCGTG TCCCGAGAGC GTCTTCTTCC ATTTCCTCGT CTCCGAGACT GACCTAGAAT CCTTGATTCG TTCGACTTTT CCCGAATTGA AATTAAAGGT TTACTTCTTC GATCCGGAGA TTGTACGGAC TCTGATCTCA ACCTCCGTCA GACAAGCGCT TGAGCAGCCG TTGAATTACG CTCGAAATTA CCTTGCTGAT CTTCTTGAGC CTTGCGTGCG TCGCGTCATT TACCTAGATT CCGATCTAGT CGTCGTCGAC GATATCGCGA AGCTGTGGAA GACGAACTTG GGATCGAAAA CGATCGGAGC TCCTGAATAC TGTCACGCGA ACTTCACGAA GTATTTCACA CCGGCGTTCT GGTCCGACGA GAGGTTCTCC GGAGCTTTCA CCGGGAGAAA ACCGTGCTAC TTCAACACGG GAGTGATGGT GATGGATCTA GAGAGATGGA GGCGCGTAGG GTACACGGAG GTGATAGAGA AATGGATGGA GATTCAGAAG AGTGATAGGA TCTACGAGCT GGGATCATTG CCACCGTTCT TGCTGGTATT CGCCGGAGAA GTAGCTCCGA TAGAGCATCG GTGGAACCAG CATGGACTTG GTGGAGATAA CGTGAGAGGA AGCTGTAGAG ATCTACATCC CGGTCCGGTT AGCTTGCTTC ATTGGTCCGG TAGTGGTAAA CCGTGGTTCC GGTTAGATTC GAGACGGCCT TGTCCACTTG ATACTCTTTG GGCACCTTAT GATTTGTATG GACACTAGTC TCGCTGATGA TGATGATGAT GATGATCTCT GTTATTACAT ATTATAGTCT CAGCTGGTAA ATTCTCTCAT CGCCTTTGAC AAAAAACAAA AACCATTAAT TCTTTCTTTC TTCTTTTGAT TTACCAACTT TTTGTTGGAA TTTGTTTCGT TCCTCTGTAC TCTATTCGAT TGTTCTGTGC ATAAAACCAT AGGATACATT CAGATTTGTT GTACAGACTT TTTACCATAT GTTTTTTTAA TATAATTCTG TCATCTTTTT T 
Length1931
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19725285.. 19727285
Download Sequence
A.thaliana
AGI-codeAT3G62660.1
Descriptiongalacturonosyltransferase-like 7
TAIR curator summaryEncodes a protein with putative galacturonosyltransferase activity.
Alias[GATL7][galacturonosyltransferase-like 7]
Gene coexpression
MR
MR Locus Description
10.9545 Ahg472494 Major facilitator superfamily protein
11.3137 Ahg931278 RING/U-box superfamily protein
22.0227 Ahg491681 Family of unknown function (DUF566)
25.7488 Ahg926990 Thioredoxin superfamily protein
29.4618 Ahg470059 Protein of unknown function (DUF630 and DUF632)
30.7896 Ahg480195 ARM repeat superfamily protein
40.9512 Ahg951297 Plant invertase/pectin methylesterase inhibitor superfamily
51.2055 Ahg494605 Plant protein of unknown function (DUF946)
52.8204 Ahg490525 Protein of unknown function (DUF3741)
56.8683 Ahg486626 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression