Detail



ID : Ahg494689

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494689|fgenesh2_kg.8__505__AT5G43160.1
Sequence
ATGTCGGAGA TGACAGCTGC AATTTCACCT TCTTTCAACG CAAACACTAA ACATAACAAA CCACCGTCGT TTCCATCGGA ATCATCAAAT CGCCGGCCAA AAACACGAGA CGTAGCATCA CGATACCTCG GCGGTGCTTC TTCTTTATTT CACCAATCAT CACCGAAGAG ATGTCAATCT CCGACCGTTA CTCGACCGGT TGCTACAAAT CGGCCGAAAT CAACACCGCG TCGTGAGTCG TTAGATCGTG GAGAAGTTTC TAAAGCGCAG AGAATGTTGT TGACTTCTGG GAGAAGCTTG TTTGCGTCGT TTCAAGCGGA TTCGTTTACA GGGAATGAGA ATAGATCGCA GTTGATTTCA TCTCCGATTA CTCCAGTGAG AGGTACGAAG ACGACTTCGT CGGCAACAAC ATCTAGAAGT GGTGGAGGTA AACAAGAGAA ATTGAAGCTC TCTGATCAAT GGCCTAGGTC TCTGCAACCT AATTGTTTGA GTAGAAGTGT CGACTTTACA GATACTAGGA AGAAACTAAC CGGATCTGGC AATGGTGTAG CTAGAGTTCT GCAGAATTCC ATGGTGAATA ATAGACCGGT TTCGCGTGAA CGGAGAGATT CATTGAGTGT TGATTTAGAG ACAGAGAGTG TTTCTTCTGG AAGCTCTAAT GGAAGAGGGA AAATGTTACT AGTTTGTGGC AATGTGGTTA AGGCGAGAGT TTCGCAATCG AGGTGGCAGG ATCGGTTAGA GACTAGCTCA CATGGACTGA GGAAGATATC TGTGGATAGT TGTGTATTGT CCCCAAAAGG AAGCCAATTG TTTCCAAAAA GTGAGCAGAT TCGACCTGTT TCACCTGGTA AATTTGGAAC CAGCATTGTT AGAGGAATAA GCCCTTCGAA ATGCGTTGTT CCTCCAAGAG GGGTTACTCC ATCAGGCAGA ATGAGTCCAC TAAGAGTGAG AAGCTCGATG AGTAAAAATA CGCCTTTGAT TCCGAATTTT GCTGTGGATG CTAAAGAGAA GATCAGAGAT AATGGAGTTG CTGATGCTCA CTTGTTAAAG CTATTACACA ATAGATTGCT CCAATGGCAA TTTGCTAATG CACGAGCAAA TGTTGTTATC TCTGCACAAA AGATGAGAGC GGAGAAAAGA CTGTGCAATG CATGGATAAG TATCTCTAAG CTATATGATT CTGTCAGAGC GAAAAGAATC GAATTGCAGC ACCTGAAGCA GAATTTGAAA CTGATATCTA TTCTCAATAG GCAGATGGGA CATCTAGAAG AGTGGTTGGT TATGGACCGG GATTATATGG GTTCTTTAGT AGGAGCTGCT GAAGCGCTAA AAGGCAGCAC ACTTTGTCTA CCTGTTGATT GCGGGGCAAT GGTAAATGTA CAAAGTGTTA AGGATGCCAT TTGTTCAGCA GTTGATGTTA TGCAAGCAAT GGCATCTTCC ATATGCTTGT TGCTGCCAAA GGTTGGGAAA ATAAGTAGCT TGGCAACAGA ACTTGGCCGT GTGGATATCA AGGAGGAAGG GATGCTCGAC ATGTGCCGAG ACCTCCTAAA CACAATCTCA GCTCTGCAGG TACAATATCT CAATTTCATT ATCGGTATTT CCCCTCTATA TCTAGAGATA TGGTTATTTA TTTTTAAAAT ATGCAGGTAA 
Length1650
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4389868.. 4392482
Download Sequence
A.thaliana
AGI-codeAT5G43160.1
DescriptionFamily of unknown function (DUF566)
TAIR curator summary
Alias[QWRF9][QWRF domain containing 9]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg491073 DEAD/DEAH box RNA helicase family protein
26.533 Ahg927275 mechanosensitive channel of small conductance-like 6
39.6485 Ahg489123 cellulose synthase-like A02
56.7715 Ahg903543 protein kinase family protein
61.1146 Ahg936082 expansin A15
74.7864 Ahg474990 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
91.8041 Ahg951699 Ovate family protein
97.4269 Ahg481413 DNA-binding protein phosphatase 1
97.903 Ahg479268 receptor-like kinase 902
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression