Detail



ID : Ahg494884

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494884|fgenesh2_kg.8__700__AT5G48330.1
Sequence
TCAAGATGCC GGAATCACTT ACATAATGAA AACTTTTCTT TCTCCGGCGA TATGCTTCGA TTATGGTCGA TAGCGAAAGT ACAGGTCAGG AATGTTTCTA CCTCCGAATC CCTCTTCTGC AGACACGTTC TTTTCAATGG ATTTGTCAGA CGACAATTCA CGAGCACTAG GGGCGAAAGA AGAACAGTGA TGAGCTTCGG TGACGGAAGC CATGGAGCTC TTGGTCTCTC ATCATCGTCG ATTCCAGGCA TGGGAATGGA TGCTTACGAA CCTACCGTTG TTTCTAATTT GCCTTCCGAT ATCTCTTTCA TATCCGCCGG ACACTATCAT TCTCTTGCCG TTACATTTGG CGGTGAGATT TGGGCTTGGG GTCGCAACAA TGAAGGCCAG CTCGGTCGAA TCACTGTTGA TTCTGGTAGA GATTCAAGGA GTGAACCGAA GAGAGTGGAA GGTCTAGATA ATGTGAATGT CCGGGCTGCG TTTGCGTCTG GAGTTGTTTC AGCGGCTATT GGAGATGATG GCTCTTTGTG GGTTTGGGGA AGATCTAAAA GAGGGCAGCT TGGGCTTGGA AAAGGTATCA TAGAAGCTCG AGTTCCTTCG AGAGTTGAAA CTTTAGCTGC AGAGCACGTC GTGAAGGTAT CATTAGGTTG GGGGCACGCA CTTGCGCTTA CTGTGGATGG TAAAGTTTTT GGATGGGGTT ATGTAGCTGA TGGAAGAGTA GGCAATGTTG GACTTCCACT TGAAGCATCT CTGTTAGATA TAATTACAGA TGGGTCGATG AAAGATCAAC ACGCTGCGGA TTTGAATCTT GAAGCAGCGG AAAAGAAGGT TGTGGAAGCA ATGAGCAAGG AGAACGACAT GCCAATAGCG TGGGAACCTC GTCTGGTGGA AGAAACACGT AACGTGAAGG TAGCAGATAT TGCGTGCGGT TCCGATCACT CCTTGATCCT TTGTCATGAT GGCACACTTT TGAGCTCTGG GAGCAACATC TATGGTCAGT TGGGTCGGTC TAAACAAGAC CTCGGAATGA CACCTGTTGA CATAACTGAA TCCCCGATCT CTATTGCAGC TGGTCTTGGT CATTCACTAG CTATCTGCAA CAGAGATGAA AGAAAGATTC TCTCATGGGG TTGGAACCGT AGCCGGCAGC TTGGTAGGGG AAAACCGGAA CACCTGCCAA GAGAAGTAGA AGGTTTTGAT GGGGAAAATC CAGCTTCAGT ATCAGCAGGA CGTGTGCATT CCTTGTGTGT AACAGAGAAA GGAGAAGCTT GGGTTTGGGG TTGTGGGAAG AATGGTAGGC TTGGTTTAGG AAGCTCGAGC GATGAGCCTG AACCAATGTT GTTAGAGGAC ATAGAGGGTT GTGTTCTTCA AACAGTCGCT GGCTTTGATC ACAGCCTGAT CTTAGTGGCT GAATAGCCCC ACCAAATCAA ATGTCTAGGA AACATTGATC TTGAATAATT ATATCATGTA TCTACGTGCG ATCAGTTGCT TTTTGGGTGA ATTGGTGAAA TAAAATTAGA AAGATCAT 
Length1528
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10928002.. 10929896
Download Sequence
A.thaliana
AGI-codeAT5G48330.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias[RUG2][RCC1/UVR8/GEF-like 2]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg926196 BSD domain-containing protein
4.89898 Ahg939686 Phosphatidic acid phosphatase (PAP2) family protein
5.09902 Ahg495015 FAD/NAD(P)-binding oxidoreductase family protein
14.6969 Ahg316788 Tetratricopeptide repeat (TPR)-like superfamily protein
26.8328 Ahg482789 Protein kinase superfamily protein
29.7993 Ahg476853 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
30.2985 Ahg495474 Yippee family putative zinc-binding protein
30.7571 Ahg496612 RNA methyltransferase family protein
32.0156 Ahg923423 Family of unknown function (DUF566)
32.4037 Ahg492161 chloroplast sulfur E
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression