Detail



ID : Ahg946113

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946113|scaffold_702342.1
Sequence
TTGTTGCAGA AACCAAAACA AAAATATGAA ACTCCAAAGC CTCTTTAGCT ATGTATTGAT CTTCTCCACT ACCATTACCT TACTTCTATC AAGTTCTCAT CCGGTTTCAG CTAACCGGAC CAATCAAGCC GGTTTCCTCC AATGTCTCTC TCTCCGGTTT AACGACTCTA CCATCGTTTC AAGAGTCATA CACACACCAA ACGACACTTC TTTCTCCTCT GTCTTAGCGT CATCAATACA GAATCCAAGA TTCTCTGCTC CTGATACACC TAAACCGGTT TTAATCCTAA CTCCGGTTCA ACCTTCCGAT GTTCAATCAG CGGTTAAATG CGCACGCCGG TTCGATATCC ACATCAGAAC CCGAAGCGGA GGACACGATT ACGAAGGACT CTCTTACGTT ACCCGCAAAC CCTTCGTAAT CCTCGATTTA AGAAACCTCC GGTCTATCAC AATTGACGTC GATAACCGGT CGGTTTGGGT CCAAACCGGA GCCACGATCG GTGAACTATT CTGCGAAATC GGCAAAAAGA ATCGAACTTT AGCGTTCCCC GCCGGTGTTT GCCCCACCGT AGGCGTCGGA GGACACTTCA GCGGCGGAGG CTACGGTACT TTACTGAGAA AATACGGTTT GGCAGCCGAT CACGTGATAG ACGCACGTGT TGTCGATGCA CGAGGGAGGA TTCTTGAAAG ACGAGAGATG GGTGAAGATT TCTTCTGGGC GATTCGTGGA GGTGGTGGAT CAAGCTTTTG CGTTGTACTT TCATGGAAGA TCGGTTTAAT CAATGTTCCA TCAACAGTAA CTGTCTTCAA CGTCACGAAA TTCTCAGAAC AGAGTTCTTT AAAGATCATT CATCGTTGGC AATTTGTGTC TGATAGAGTC TCTGATGATT TATTCATACG AGTTATGTTG CAGAGATACA AGAACATGGT TCGAGCTTCG TTTCCGGGTT TGTATCTTGG TTCGGTTAAC AATCTGTTGA AAATGGTAAA CCGGGAATTT CCTGAATTGG GTTTGGAGGA AGATGATTGT CAAGAGATGA GTTGGATTGA GTCTGTGGTT TGGTTTGCTG AGTTAGGAGA AGAACCGATC GATGTTCTTA GTAAACGTAC ACGAGCGTCG TTAGCTTTCA AGGCTAAATC TGATTTTGTT CAAGAACCAC TGCCTGAAAC CGCGATTTCA AATTTGTGGA GACGGTTGCA AGAACCGGAA GCAGAGCATG CTCAGCTAAT TTTCACTCCA TTTGGTGGTA AAATGAGTGA GATTGCGGAT TACGAGACGC CATTTCCGCA TCGAAAGGGG AATATATTCG AGATTCAGTA TCTGAATTAC TGGAGAGGAG ACGTGAAAGA GAAGTATATG AGATGGGTGG AGAGAGTTTA CGATGATATG AGTGAGTTTG TGGCGAGTTC TCCGAGAGGA GCTTATATAA ATCTCAGAGA TCTTGATTTG GGGATGTATG TTGGAGGTAA GAGGAGTAAG TACGAGGAAG GAAAGAGTTG GGGAGTGAAG TATTTTAAAG GTAATTTCGA GAGATTGGTG AGGGTTAAGA CAAGTGTTGA TCCTTTTGAT TTCTTCTGTG ATGAACAGAG TATTCCTCCT TTTAAATCTG TTGAAGTTAT TTGAAAGATT CAAGATTTTG TGCC 
Length1644
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8963953.. 8965601
Download Sequence
A.thaliana
AGI-codeAT4G20820.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.74597 Ahg494948 Tetratricopeptide repeat (TPR)-like superfamily protein
15 Ahg490118 methionine sulfoxide reductase B5
18.6815 Ahg496002 Undecaprenyl pyrophosphate synthetase family protein
24.4131 Ahg478284 ascorbate peroxidase 2
35.2987 Ahg922779 serine hydroxymethyltransferase 7
39.0768 Ahg923463 FTSH protease 1
39.8748 Ahg482707 plasma membrane intrinsic protein 2
46.8615 Ahg472495 Major facilitator superfamily protein
50.4678 Ahg920712 ethylene-dependent gravitropism-deficient and yellow-green-like 3
54.5436 Ahg477829 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression