Detail



ID : Ahg494969

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494969|fgenesh2_kg.8__785__AT3G49620.1
Sequence
GGGCTGCTCC ATTTGGCCTT TAGAAATCCT AAGGGGCAAT TTATATCATC GCAAATTTCG TCTTTACGTA CGTAAGAGCA AAGCGTTTCT GTCATTTCCT TCATGTCGAA ATGGTGACTG CAGACTTCAA ATCCCTACTA CCAGTTATCG ACATCAGTCC TTTACTGGCC AAATGTGATG ATTTCGACAT GGCTAAGGAT GCCGGGGTTG CGGAAGTTGT CAAAAAACTA GACAGGGCAT GTCGGGACGT CGGATTCTTC TACGTGGTTG GTCATGGAAT ATCGGATGAT CTTATAAAGA AGGTGAGAGA GGTGACGCAT CAATTTTTCG AGCTTCCTTA TGAAGAGAAA CTTAAGATCA AGATTACTCC AGCTGGTGGT TACAGAGGAT ATCAGAGAAT TGGAGTAAAT TTTACAAGTG GGAAACAAGA TATGCACGAA GCCATTGATT GTTACAGAGA GTTCAAGCAA GGGAGGTATG GGGACATTGG AAAGGTCTTG GAAGGGTCAA ACCATTGGCC AGGGAATCCT CAAGAGTACA AAGATTTGAT GGAGGAGTAC ATTAAGCTAT GCACAGATCT TTCTAGAAAT ATCTTAAGGG GAATCTCCTT AGCCCTTGGT GGATCACCTT ATGAGTTCGA GGGAAAGATG CTTAGCGACC CTTTTTGGGT AATGCGTATC ATTGGTTATC CAGGTGTAAA CCAAGAAAAT GTTATTGGAT GTGGAGCTCA CACTGACTAT GGCTTGTTGA CACTTATAAA TCAAGATGAT GATAAAACTG CTCTTCAGGT GAAAAACGTG GACGGTGATT GGATACCAGC TATTCCGATC CCTGGATCGT TTATCTGCAA CATCGGTGAC ATGTTAACGA TACTATCAAA CGGAGTTTAC CAATCCACAC TACATAAAGT AATCAACAAC TCTCCTAAAT ACCGTGTTTG TGTTGCATTC TTCTACGAGA CTAACTTCGA GGCGGAGGTG GAGCCACTGG ATATCTTCAA AGAGAAGTAC CCAAGAAAAG AAACATCTCA AGTTGCCAAA AGAGTTGTCT ATGGACAGCA TCTGATTAAC AAAGTCCTGA CTACCTTTGC AAATTTAGTG GAAAACAGTT AATATGGTTG GTTGGGCTTT GGATGGTAAT TGTTTTACCT AAAATAAAAT AAAAATTGCA GGCGACAATA AATATAA 
Length1187
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11824937.. 11830222
Download Sequence
A.thaliana
AGI-codeAT3G49620.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryencodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.
Alias[DIN11][DARK INDUCIBLE 11]
Gene coexpression
MR
MR Locus Description
1 Virus1649
2 Ahg941873 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
3.4641 Virus1235
4.58258 Virus1547
6 Ahg946162 Pectin lyase-like superfamily protein
7.07107 Ahg934969
10.4881 Ahg943059 Ubiquitin-like superfamily protein
12.9615 Ahg952027 C2 domain-containing protein
13.6748 Virus1173
16.7332 Virus0773
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression