Detail



ID : Ahg946162

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946162|scaffold_702391.1
Sequence
TATAAAACAA AAATAACAAA ATGAAGTTCC ATTGCTTTGT TTGCTTGTTA CTGTTTATCC TCACAATTTC AATGGAATTT GAAGAGACAT TATCCTTCAG AAGAAGAGAC ATGACAAAGC TTTCAGAATT CCAAGACAAG ATCCAAGAAA GACTTGCAAG TTGTAGTCAC TTCATTCTCC CACCATTGTC TTCTCCTTCT TTTCCATTTC CCAAAATGTT ACAGATTGGG GTTCATATGC TGCCACATGT TGCCGATCTT GGAGGTCTTG TTATTGATCT CCAGGGTGGA AGTTATATGA TCGGAAAACC TCTCAGGTTT CCTTCCTCGG GTGGTGGAAA TCTAGTGGTA AAAGGCGGGA CTTTGCGGGC ATCAAGAGTG TTTCCTGGAG ATCGTCATTT GGTTGAACTC GTAGCATCAA ACTCCAGGAT CTTCTATGAG GATTTGACCT TCCGAGACAT TCTGTTCGAC TCAAGCTTCC GAGGCGGGGG TATTTTTGTA ACTGACTCAG CTCGTATCCG CATAACCGAT TGCTACTTCC TCCATTTCAC AACTCAGGGG ATTAAAATCA AGGGTGGCCA CGAGACATAC ATTTCAAACT CCTTTTTGGG GCAACGTTCA ACGGTAGGTG GAGACCCACA AGAAATAAAG TTTTCCAGGA CAGGAATCGA TATCTCAAGT AACGATAATG CCATTACAAA TGTAGTGATT TTCTCGGCTG GGATCGGTAT CTCGTTGAAT GGCGCGAATA TGATCACAGG CGTGCATTGC TACAATAAAG CTACATGGTT TGGTGGAATC GGCATTCTAG TGAAATCACA TTTAACAAGG ATAGACAATT GTTACCTTGA TTACACAGGT ATAGTCATTG AAGATCCTGT TCACGTTCAT GTCACAAATT CTCTGTTCTT AGGAGATGCT AACATCGTCT TGAGATCAGT ACACGGGAAG ATTTCCGGGT TAAACATCGT CAATAGCATG TTTAGCGGTA CTGCCAAATT CAACTTCCCG ATCGTCAAAC TGAAAGGAGA GTTTCATGAT ATCGATCAAG TTGTGGTTGA TCACAACAAT GCATCAGAGA TGATGTTAAA ATCAACAACC GGAATGTCAA AGGTTTACGC AAACGGGACG AGATGGGTCG CTGATTTTTC CCGTGTCTTG GTATTCCCAA ACCGGATAAA CCATTACCAG CATTCGTTTT TCGCTCAATC TGGACAGATT CCTGCAAATG CAGTGACCAA AGTCTCCAAC AATGTGGTCG TTGTAGCAAC CAATAGATAA AACAACATTC TTCACATTCA 
Length1300
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9169995.. 9171583
Download Sequence
A.thaliana
AGI-codeAT4G20040.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg889574
3.74166 Virus1649
6 Ahg494969 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
7.2111 Ahg938456 Plant self-incompatibility protein S1 family
8.12404 Virus3292
15.4272 Ahg911148
15.9687 Ahg949959
21 Ahg941873 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
23.8747 Ahg906092
25.0998 Virus1547
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression