Detail



ID : Ahg494985

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494985|fgenesh2_kg.8__801__AT5G49220.1
Sequence
TTTACTCTCT TCTCTTCTTT ATTTTTTCTG GGGAGAAAGA AATTTCACTT TTTTTTTCCG ATTTTGCTTC ATCTGGGTTT TGGATTTTTG CGATCGATTT TGAAAATTAG CAAACAATGT CGGGTTCTGG AGGAGTTTCC ATCGCACGAA CAGCGATCCG TGGTGAGAAT CGGTTTTATA ATCCACCTCC GATGCGAAGG ATGCAGCAAG AGGCGCAATT GCAGCAACAG ATTAGGGAGA AGCAACGTCG TGATGATGAA GAAGAAGAGC GAAGAAAGGC TGAGACTGTT GTGGCTATGC CTCCTCCGAG GACTAGGAAA GGTCTTGGTG TGTCGGAGAG TAAGAATCGG GTTTTGGTTT CTGGTTCGGA AGTTTATGCC GGTTCTTCTG ATTCTTCTTC CGGGTCGGGT CGGGTTCTTA GTGATGGGTC TAACTTGGAT CGGTTCTTGG AGCATACTAC TCCTGTTGTT CCTGCCCGTT TATTTCCCAT GAGGAGCAGG TGGGAACTTA AAAACCGCGA ATCGGATTGC CATACGTATT TTGTTTTGGA GGATCTTTGG GAGTCGTTTG CAGAATGGAG TGCATACGGT GCTGGTGTTC CTCTAGAAAT GCATCCTCTA GAAATGTATG GGAGTGACTC CACCGTGCAG TATTATGTGC CGTACTTATC TGGTATTCAG TTGTATGTGG ATCCATCGAA GAAGCCTAGG AACCCAGTTG AAGATAATGA AGGAAGTAGT GAAGGAAGCA GCAACAGTAA GGTCGAGAAG TTACCTAATC ATGCTAAGAA TTTGCCGAAT GCGGTGGACT TGAGTGTCAG TGAACTGAAT AGAATTAGTC TGAGAGATCA ATCTATTGCT GGCTCATTGT CTAGTGGAGA AACTGAGATC AGCGATCCGC AGGGACGATT ACTATTCGAG TACTTGGAGT ATGAACCTCC GTTTGGCCGG GAACCTCTGG CTAACAAAGT CTCGGATCTG GCGTCAAGAT TTCCTGAGCT AATGACATAC CGGAGCTGTG ATCTTCTTCC TTCAAGTTGG GTCTCTGTGT CATGGTATCC AATATACAGA ATACCGGTTG GTCCAACACT ACAAAATCTC GATGCCTGCT TTCTAACTTT TCACTCTCTC TCAACAGCAC CTCCTCAAAG TGCTATGGGT TGTAGTGATT CGGAACCATC CACAAAGCTA CCGTTGCCTA CTTTTGGACT CGCATCTTAT AAGCTGAAAG TATCTGTGTG GAACCAAAAT AGAACTCAAG AGTCGCAAAA GATCACTTCT TTACTACAAG CTGCAGATAA ATGGCTCAAG CGTCTGCAAG TTGATCATCC AGACTACAGA TTCTTCACCT CTAACAGCCC ACAAATGAGG TGAAAATGAA AGATACTTTC TTGACCATCG ATTTGGCTCT GGTCTGATCT AAAGACCCAT TATCTGCTGC TCTTACTTCA CACATAAAGT CTCTCTCTCT TACACTGAAG AACCACCAAA TAGTGGCCAG ACTCTTGCGT GTTTTTCAGG CGATTTAAGA GTCTCTGCTG TTTCGTTTCC AGAAGATGCT TTGTGAATTG TAGCCTAATC TTCCTTTTTC TTCTGAAACT TAGTCTTTTG CTTTTCCCTG AATAAGTATT TGAGGAGCCC ATATAGTGAA ATTTGCGAGG AGTGTTTTTG TAATGTTGAG ATGCAACACT TTTTGTGATA CAATTTGATT ACTGAACTGA AACACAGGTT TG 
Length1732
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12201202.. 12203570
Download Sequence
A.thaliana
AGI-codeAT5G49220.1
DescriptionProtein of unknown function (DUF789)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.3288 Ahg329738 ubiquitin-specific protease 20
13.8564 Ahg474990 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
29.5466 Ahg470495 general transcription factor II H2
40.5463 Ahg486687 Dof-type zinc finger DNA-binding family protein
46.3681 Ahg478143 PHD finger family protein
68.5857 Ahg492249 FtsJ-like methyltransferase family protein
73.0958 Ahg933903 heat shock protein 60-2
76.5245 Ahg921543 Ribosomal protein L16p/L10e family protein
80.8703 Ahg486573 Calcium-dependent lipid-binding (CaLB domain) family protein
85.0353 Ahg919570 DNA polymerase epsilon catalytic subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression