Detail



ID : Ahg486573

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486573|fgenesh2_kg.5__2565__AT3G61050.2
Sequence
TCTCTCTCTC TGGCCTACCG AAAATACTTG AATGCATTCT TAATTTGTTC TGATTCTCCC ACTTGACCAT TCCCCTGAAG ATAAACCGTT GCCGACGCTT CTCGCCGATA ACCCAGACCT TCGGTTTTGG AGTAACGAAA ATGGGTTTGA TTTCTGGAAT TCTGTTCGGG ATTATCTTCG GCGTAGCTCT AATGGCTGGC TGGAGTCGTA TGATGACTCA CCGATCGTCC AAGCGAGTCG CCAAGGCAGT TGATATGAAA CTTCTAGGCT CTCTTAGCAG AGATGATTTG AAGAAAATTT GTGGTGATAA TTTTCCTCAA TGGATATCGT TTCCAGCATT TGAACAGGTC AAGTGGCTGA ATAAACTACT GAGCAAGATG TGGCCTTATA TTGCAGAGGC AGCAACTATG GTAATAAGAG ATTCTGTTGA ACCTCTGCTT GAAGATTACA GACCACCAGG AATTACTTCC CTGAAGTTCA GCAAATTGAC TTTGGGTAAC GTAGCACCAA AGATTGAAGG TATTCGTGTT CAAAGTTTCA AGGAAGGTCA AGTCACAATG GATGTTGATC TTCGATGGGG TGGTGATCCA AATATTGTTT TAGGTGTTAC AGCACTTGTT GCTTCCATAC CCATTCAGTT GAAGGATCTT CAAGTTTTCA CAGTTGCACG TGTTATCTTT CAACTTGCGG ATGAGATTCC TTGTATATCT GCTGTTGTTG TTGCTCTACT TGCTGAGCCA AAACCAAGAA TTGATTACAC TCTGAAGGCT GTCGGTGGAA GCTTAACAGC GATTCCTGGA CTATCTGATA TGATTGATGA TACTGTTGAT ACGATCGTCA AAGACATGCT TCAGTGGCCT CACAGAATTG TTGTTCCCAT TGGTGGTATT CCTGTTGATT TAAGTGATTT GGAGCTTAAA CCACAGGGAA AGCTTATAGT AACAGTAGTG AAAGCAACTA ACTTGAAGAA TAAGGAATTG ATTGGAAAAT CTGACCCTTA TGCTACCATC CACATTCGTC CTGTATTCAA GTATAAAACA AAGGCAATCG AGAACAATCT GAATCCTGTT TGGGATCAAA CATTCGAATT GATTGCAGAG GACAAAGAAA CTCAGTCCCT CACTGTAGAG GTATTTGATA AAGACGTAGG CCAAGATGAG CGTCTGGGAC TTGTGAAACT TCCCTTAAGC AGTTTGGAAG CCGGAGTAAC AAAAGAACTG GAGCTAAATC TGTTATCTTC ACTTGATACT TTGAAAGTAA AAGATAAGAA AGATAGAGGA AGTATAACTC TTAAGGTACA TTATCATGAG TTCAACAAAG AGGAGCAATT GGCTGCATTA GAAGAGGAGA AGAAGATCAT GGAAGAAAGG AAGAGACTGA AGGAAGCAGG AGTGATAGGT AGCACGATGG ATGCAGTTGG GATGGTGGGA AGTGGGCTTG GTGCTGGTGT AGGAATGGTT GGGACAGGGA TTGGGGCAGG AGTCGGATTG GTTGGAACCG GAGTGAGCTC GGGTGTTGGG ATGGTTGGTA GCGGTTTTGG AGCGGTCGGT AGCGGATTGA GCAAAGCAGG GAGATTCATG GGAAGAACAA TCACAGGTCA GTCTAGCAAA CGTAGTGGCT CCTCAACACC TGTGAATACA GTTCCAGAGA ACGATGGTGC GAAACAGCAG TAAGTAAACT TTGGGTTTAA GCCATGATCA TAACATCGTG TTACTTTTTA CTCTTTATTG TTTTTTTTAT TCCTTTACCT CTCTGGAATT TGATTTCTGG ATTCACTGCA GTAATTTGTT TTCGTTGTGA GCTTTCAAAT TCAAAGTCTT GTACAAAAGT CATTTGTTTA ATCGTCCCAT AAACAATAGA TTTCCT 
Length1866
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19005664.. 19009583
Download Sequence
A.thaliana
AGI-codeAT3G61050.1
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
TAIR curator summary
Alias[AtCLB][NTMC2T4][NTMC2TYPE4][calcium-dependent lipid-binding protein]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg485126 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
10.8167 Ahg923937 regulatory particle triple-A 1A
13.784 Ahg941463 E1 C-terminal related 1
13.8564 Ahg483386 MAP kinase 20
15.8114 Ahg474178 Membrane trafficking VPS53 family protein
16.7332 Ahg944195 RUB1 conjugating enzyme 1
20.2978 Ahg476130 SIN3-like 4
27.8209 Ahg472400 Calcium-binding EF hand family protein
30.2985 Ahg493620 proteasome alpha subunit A1
30.8545 Ahg943915 Leucine-rich receptor-like protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression