Detail



ID : Ahg494997

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494997|fgenesh2_kg.8__813__AT5G49400.1
Sequence
CTCTCAAATT GGCTCATCTT CCCGTTAATT CCAAGCACGC TCCTTCGATC TTCCTCTTGG TGATACTCTC GTTTCTAATT GTAACATGTC TAATTCAAAG GACGAGAAAG CACAAGTTGC AGCTGATAAA ATCAAGGCTG CAACACTCAC TGCTGCTAAA GGTCTGAGTC GTACTCAAGC TGAGCGAGCA GCAGCTGCAG CGGCGAGAAA CGTTAACGCT TATGGGCAAA AGGAAGAAGG TCCCAGTAGA TGGCAGGAGA AAAGAGAATT AAAGAGGCAG ATGTATTTGA TGAGTACCGA GAAAGCGGTT AGGCTTGGTG AAAGGAAAGA CAAAACTATG TCAGCTTCTG CCGTGGGAAG CAGTGCTTCG GCTGCTTCAC TGTGCCAGAA ATGTTTCCAA ACTGGACATT GGACTTATGA GTGTAAGAAT GAAAGGGTTT ATATCTCCAG GCCTTCGAGA ACCCAGCAGC TTAAGAATCC TAAACTGAGA ATGAAGCCTT CGATTGATGA TCTTGATGGT AATGATGATG ATGATGATGA AGAAAAGCCA GATGCAACTA ATGGGAAAGC GGAAGTGGAG AGGCGGTCTA AGAAGAGTAA GAGAAAGCAT AGGTCAAAGT CTGATTCTGG AAGTGACAGT GAAGCCTCTG TGTTTGAAAC AGATAGTGAC GGCTCATCTG GAGAGAGTAG TTCAGAATAC AGTTCATCTT CGGACTCAGA GGACGAAAGG AGGAGGAAAA GAAAGGCGAA GAAGAGCAAG AAGAAACAAA AGCAGAGTAA AGAAAGGCGA AGAAGATACA GCTCTTCTTC GTCGGAGTCA TCTGAGTCAG AATCAGCTTC GGACTCAGAT TCTGATGGAG ATAGAAGCAG AAGAAAGAAG AAGAGCAAGA GGCACAGCAA CAAACGTCGA TGAATTGGTT TTCAGGAAAT CAGAAAGTGG ATGAAAATTC TTATATGCCT TTTTAGAATG AATCATTTTG TTCTACATGA AGAAAACTCA CTGCTTCTTT CTTCTTTTTC CTCAAGTTCG TTTTTTCGTT TGTCAGCCAT TTATGGCTGT GTTGTAACAA ACTGATGAAT CTTAGAATCC CCTCAAGTTT TCATAGCTC 
Length1109
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12327943.. 12357204
Download Sequence
A.thaliana
AGI-codeAT5G49400.1
Descriptionzinc knuckle (CCHC-type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.5967 Ahg344464 Structural maintenance of chromosomes (SMC) family protein
32.1248 Ahg475539 DNAJ heat shock N-terminal domain-containing protein
50.4777 Ahg934680 binding;RNA binding
52.1153 Ahg486874 Leucine-rich repeat protein kinase family protein
58.1206 Ahg355292
63.498 Ahg359344
69.8785 Ahg492669
71.2671 Ahg898070 saposin B domain-containing protein
71.624 Ahg496018 Protein kinase superfamily protein
78.7083 Ahg931395 golgin candidate 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression