| Annotation |
|---|
| Description | jgi|Araly1|344464|fgenesh1_pg.C_scaffold_4000806 |
| Sequence |
ATGTATATCA AGCAGGTTAT TATCGAAGGA TTTAAGAGTT ACAAAGAGCA AGTTGCTACT GAGGATTTTA GTAACAAGGT CAATTGTGTT GTTGGGGCAA ATGGGTCTGG GAAAAGCAAT TTCTTCCATG CAATTCGTTT TGTATTGAGT GACATCTTCC AAAATCTGCG GAGTGAAGAT AGGCATGCAT TACTCCACGA AGGTGCTGGT CATCAAGTCG TGTCTGCGTT TGTGGAGATT GTGTTTGATA ATTCTGACAA CCGGTTCCCG GTTGATAAGG AAGAAATACG CTTGCGCCGA ACGGTTGGCC TGAAGAAGGA TGATTATTTC TTGGATGGGA AACACATTAC AAAAGGTGAA GTTATGAATT TATTGGAGAG TGCTGGATTT TCTCGTGCTA ATCCTTACTA TGTTGTTCAA CAAGGAAAGA TAGCCTCGTT AACACTGATG AAAGACATAG AACGGCTGGA TCTGCTAAAA GAGATAGGTG GTACTCGTGT TTATGAGGAG AGGCGTCGTG AGAGTTTAAA AATTATGCAG GAAACAGGCA AGTTATCAGT GTGCAGAAAT AAACGGAAGC AGATCATCGA AGTTGTCCAC TACTTGGATG AAAGACTAAG AGAACTGGAC GAAGAGAAAG AAGAACTCAG AAAATATCAA CAACTTGACA AGCAGAGAAA ATCACTGGAA TACACCATTT ACGAAAAAGA GCTTCACGAT GCTCGGGAGA AACTGGAACA GGTAGAAGTT GCAAGAACTA AGGCATCTGA AGAGTCTACA AGAATGTATG ATAGAGTTGA GAAGGCCCAG GACGACTCCA AGTCCTTAGA TGAGTCCCTG AAAGAGCTGA CAAAAGAGCT TCAGATGTTA TACAAGGAGA AAGAAACTGT TGAAGTTCAA CAAACTGAAG CTATAGAGAA GAAGACAAAG CTGGAGCTTG ATGTGAAGGA CTTTCAGGAT CGAATTACTG GAAATTTTCA GTCTAAGAAT GATGCACTTG AGCAACTTAA TACGGTGGAA AGAGAAATGA AGGATTCTGA GAGGGAACTG GAGGCAATTA ATCCTTTGTA TGCAAGTTAT CTTGACAAGG AGAAGCAGGC ATCAAAAAGA ATCAATGAGC TGGAAAAACA ACTTAGCATT CTATATCAGA AACAGGGACG TGCAACTCAA TTTTCAAGTA AGGCTGCCCG AGATAAATGG CTCAGGAAAG AGATTGAGGA TCTTAAGCGT GTTCTAGACT CAAATATGGT TCAAGAGCAC AAACTTCAGG ATGAAATTCT TCGCCTCAAA ACTGACTTGA TAGAGCGTGA TGAGCACATC AAGAAACATG AAGTGAAAAT TGGTGAACTG GAATCTCATA TTTCCAAGTC CCATGAACTA TTCAATACTA AAAAGAGAGA GAGAGATGAA GAACAAAGAA AAAGAAAGGA AAAATGGGGA GAAGAAAGTC AACTTTCTTC TGAGATTGAC AAGTTGAAAA CGGAACTTGA ACGGGCAAAG AAAAACCTTG ATCATGCAAC TCCAGGGGAT GTAAGGAGAG GGCTGAACTC TATTCGACGG ATTTGTTCAG AGTATAGGAT CAATGGAGTT TTTGGTCCAC TTGTTGAGTT GGTTGATTGC GATGAAAAGT TTTTCACTGC AGTTGAAGTC ACTGCTGGAA ACAGCCTATT TAACGTGGTA GTTGAGAATG ATGATATTTC AACCAAGATA ATTAGACACC TGAATTCTCT CAAGGGTGGA CGAGTGACCT TCCTACCTCT GAATCGGATA AAGGCGCCTC GCGTCAACTA TCCAAAAGAT TCTGATGCAA TACCACTGTT GAGAAAGTTA AAGTTCGACT CTAAGTTTGA ACCTGCATTG GGTCAGGTTT TTGGTAGAAC AGTAGTATGT CGTGATCTGA ATGTGGCAAC AAGAGTTGCT AAGAATGATG ACCTCGATTG TATAACTATG GAAGATCAGC AGATTACACA GCTTGTTACT GAGCAGCAGA GACTTGAAGC AGACTGGACG CTCTGCAAAT TACAGGTGGA GCAACTTAAG CAAGAGATAG CTAACGCTAA TAAGCAGAAA CATGCTATAC ATAAAGCCAT TGAAAATAAG AAAAAATCAC TAGGTGATAT TGGAACACGA ATTGACCAGG TTAGATCCAG CATGTCTATG AAAGAAGCTG AAATGGGAAC AGAACTTGTG GATCACCTAA CTCCAGAAGA GAGGGTGCAA TTGTCGCAAT TAAACCCCCA AATCAAGGAC CTTAAGGAAA AAAAATTTGC ATACCAGGCA GATCGCATTG AGAGGGAGAC AAGAAAAGCA GAGTTGGAGG CTAATATTGC TACCAACTTA AAGAGGAGAA TAACTGAGTT AAAGGCTACT ATAGCTTCCA TCGACGATGA TAGTTTGCCT AGTTCAGCTG GCATGAAAGA ACAAGAACTT GATGATGCAA AATTGTTGGT CAATGAGGTC GCAAAAGAGC TCAAAAGTGT CTGTGACAGC ATTGATGAGA AGACGAAGCA AGTCAAGAAA ATTAAAGATG AGAAAGCAAA GTTAAAGGTA TCTGACAAAA GTTTCTTGTT CTCTCAGACA TTGGAAGATG ATTGCAAGGG GACACTACAG GATTTAGATA AAAAGTTGGA GGAACTATTT AGCCTACGCA ACACACTTCT TGCTAAGCAA GATGAGTATA CTAAGAAGAT TAGGGGATTG GGTCCATTGT CATCTGATAC TTTTGACACG TATAAACGGA AAAATATCAA GGAGCTGCAG AAGATGCTAC ACCGGTGCAG TGAACAGCTG CAACAATTTA GCCATGTAAA CAAGAAAGCG CTGGATCAAT ATGTGAATTT CACAGAACAG CGAGAAGAAC TTCAAAATCG GCAAGCAGAG CTTGATGCAG GAGATGAGAA AATTAAAGAG CTGATAACAG TTCTGGATCA GCGGAAAGAT GAATCTATAG AACGTACTTT CAAAGGGGTT GCACATCACT TCAAGGATGT ATTCTCTGAG CTTGTGCAAG GTGGATATGG TAACCTTGAT CTTGATGATG AAGATGATGA TGATGATGAT GGAGGTCAAG CTGTTGCAGA GGGAAGAATT GAGAAATACA TTGGTGTAAA AGTGAAGGCT TTCAGGCTGA TAATAGTTGG CACTTGTTTG CGATGTGATA CCGCACCATT CTATCTTTTT GATGAGATTG ATGCGGCACT TGATCCACAG TACCGAACTG CTGTGGGAAA CTTGATTCGT CGTCTAGCTG ATGATTATGG CACGCAGTTC ATAACCACAA CATTCCGTCC TGAGCTAGTG AGAGTTGCGG ATAAGATATA TGGAGTATTT CATAAGAACA GAGTGAGTAT TGTGAATGTT ATCACAAAGG ATCAGGCGTT GGACTTCATC GAGAAAGATC AGTCCCACGA TACCTGA |
| Length | 3417 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 10654940.. 10662671 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G27170.1 |
| Description | Structural maintenance of chromosomes (SMC) family protein |
| TAIR curator summary | Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. |
| Alias | [SMC3][TTN7][STRUCTURAL MAINTENANCE OF CHROMOSOMES 3][TITAN7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg471712 | protein-protein interaction regulator family protein |
| 3.31662 |
Ahg472093 | DNAJ heat shock N-terminal domain-containing protein |
| 4.12311 |
Ahg896860 | glycine-rich protein |
| 5.09902 |
Ahg494293 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 5.47723 |
Ahg472301 | high mobility group B2 |
| 7.07107 |
Ahg474695 | isocitrate dehydrogenase |
| 8.94427 |
Ahg473467 | RING/FYVE/PHD zinc finger superfamily protein |
| 13.1909 |
Ahg480564 | GCIP-interacting family protein |
| 13.4907 |
Ahg946015 | proline-rich spliceosome-associated (PSP) family protein |
| 13.7477 |
Ahg494645 | TRAF-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|