Detail



ID : Ahg495189

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495189|fgenesh2_kg.8__1005__AT5G51190.1
Sequence
TCATCTATGG CTTCTTCAAA TCAACAACAA CAAGAACAAG ACCAATCAGC TTTAGATCTC ATAACCCAAC ACCTTCTTAC CGATTTCCCT TCCTTAGACA CCTTTGTCTC CACCATCCAC CACTGCACCA CCTCAACTCT AAGCCAACGG AAGCCACCTC TTGCCACTAT AGCAGTTCCT ACTACTGCAC CAGTGGTTCA AGAGGATGAT CAAAGGCATT ACAGAGGCGT GAGGCGAAGA CCGTGGGGCA AGTATGCGGC TGAGATCAGA GACCCAAACA AGAAAGGTGT TCGTGTCTGG TTAGGGACTT TTGACACAGC CATGGAAGCT GCAAGGGGTT ACGACAAGGC TGCTTTTAAA CTACGTGGAA GCAAAGCCAT TCTTAACTTT CCACTTGAAG CAGGCAAGCA CGAGGACTTA GGAGACAATA ACAAGACTGT GTCTTTGAAA GCAAAGAGGA AAAGACAAGT AACGGAGGAT GTAAGCCACC TAAGCAGCAA TAAAGCTGTG AAGAGGGAAG AAACTCAGGC TCAGGCTGAG GTTTGCCCGT TAACACCGTC AAGTTGGATG GGGTTTTGGG ACGGAGAAGA CAGTAAAGAG ATGGGGATAT TCTCCGTGCC TCCATTATCT CCTTATCTAT CTCTTGGACA CTCCCACCTC GTGGTTATGT AAGCTTCTGA GAGTCAAACT GGGAACATTC CAAGCAACTT TGGATTGTGT TGAAAGCTTC TAGATTAGCT GATTGTAAAA ATTGTTTCCC TATATTCATT GATTCATCTT AAATGCAATT CTTTCTACCC 
Length800
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13529758.. 13550515
Download Sequence
A.thaliana
AGI-codeAT5G51190.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg496327 ethylene response factor 104
6.32456 Ahg908904 Toll-Interleukin-Resistance (TIR) domain-containing protein
6.48074 Ahg926659 Toll-Interleukin-Resistance (TIR) domain family protein
12 Ahg493005
13.1149 Ahg908905 Toll-Interleukin-Resistance (TIR) domain-containing protein
13.7477 Ahg480590 NAC domain containing protein 36
19.6977 Ahg934727 Protein of unknown function (DUF506)
19.799 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
20.9045 Ahg492070 Calcium-binding EF-hand family protein
22.5389 Ahg933765 Acyl-CoA N-acyltransferases (NAT) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression