Detail



ID : Ahg496327

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496327|fgenesh2_kg.8__2143__AT5G61600.1
Sequence
ATTCCCACTT CCACACATAC ACATATACAA CAGATCAATA AGAGAGTCAA TCAAGTTAAC TTGGAGTGAA GATGGCAACT AAACAAGAAG CTTTAGCTAT CGAATTCATA AGCCAACACC TTCTCACAGA CTTTGCTTCC ATGGAAACTG ACCCATCTCT TTTTACCAAT CAAGTTCACA ACTTTCACTC AGAAACAAGC CCTAGAACCA TCAGCAACCA GTCCCCTAAA CCGAACTCGA CTCTTAACCA GCGTAAACCG CCCTTACCGA ATCTATCCGT CCCAAGAATG GTCTCAACAA AGACAGAGAA AGAGGAGGAG GAAGAGAGGC ACTACAGGGG AGTGAGACGA AGACCGTGGG GAAAATATGC GGCGGAGATT AGAGATCCGA ACAAAAAGGG TTCTAGGATT TGGCTTGGGA CTTACGACAC GGCCGTGGAA GCTGCAAGAG CTTATGACCA AGCAGCGTTT CAATTGCGTG GAAGAAAAGC AATCTTGAAT TTTCCTCTCG ATATTAGGGC AACGTCCGAA ACTTGTTTTG AGGAAGGAGC CGTCGGGTTA GGGCAACGAA AGCGGGTTAA GAGTTCTCCG CCGGAGGAGG AGAAGGAGAA GGTTAGGGTT AAAGTGGAGG AAGAAGAGAG TAATACGTCG GAGACGACGG AGGCAGAGGT TGAGGCGGTA CCTTTGACGC CGTCAAGTTG GATGGGGTTT TGGGATGTGG GAGCAGGAGA TGGGATCTTC AGTATTCCTC AGTTATCTCC GACGTCTCCC AACTTCTCCG TTATCACCGT CACTTGAACT TCGGAAAAGT CAACGGACGA TGACGTTTTC ACTTGCGTCA CTCTCATGAT TTCATTTATT CTTGTATAAT ATAAAGGTAG CGGTAGTGTG CAAATATCAA ATAAGTAGTT TAATTAGTAC CAATCATTTT ATTCATTAAT TTTCTTAGAA GAATATTTGG ATGTTGAAAA TATGAACTGA ATTTTGTATT CGTTGATGTT ATAAATTTAT TGATTGTATA AACATTCTTA GTCATCAGTT TC 
Length1042
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18891987.. 18893025
Download Sequence
A.thaliana
AGI-codeAT5G61600.1
Descriptionethylene response factor 104
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Alias[ERF104][ethylene response factor 104]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg495189 Integrase-type DNA-binding superfamily protein
3.4641 Ahg485608 syntaxin of plants 122
8.30662 Ahg472349 O-methyltransferase family protein
8.3666 Ahg485812 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
9.8995 Ahg494253 ethylene responsive element binding factor 5
13.4164 Ahg493126 ethylene responsive element binding factor 1
15.3623 Ahg490986
16.2481 Ahg475320 ABC-2 and Plant PDR ABC-type transporter family protein
17.6068 Ahg478178 Protein kinase superfamily protein
18.2483 Ahg933765 Acyl-CoA N-acyltransferases (NAT) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression