| Annotation |
|---|
| Description | jgi|Araly1|355235|fgenesh1_pg.C_scaffold_7002408 |
| Sequence |
ATGGCGGCTG CTTCCCCGCG GTCACCACCG TCAACACCCC TATCATCGCA GCAGCCTCCG TCATCCCCGT CGCAGCTTCC CCTCCGTACA ATGCCGGGAT CGTACGGTTG GCCGGTTGTT GGACCTTTGT CGGACCGTTT AGATTACTTC TGGTTCCAAG GACCCGATAA GTTTTTCCGG ACAAGGGCTG AAAAGTACAA GAGCACTGTG TTCCGTACAA ACATTCCTCC GACGTTTCCT TTCTTTGGCG ACGTTAACCC TAACATTGTC GCCGTTCTCG ACGTCAAGTC TTTTAGCCAT CTCTTTGACA TGGATCTGGT TGATAAAAGA GATGTTCTCA TTGGAGACTT CCGGCCTAGC CTTGAGTTCT ACGGCGGCGT TCGTGTTGGA GTTTATCTTG ACACTACCGA GCCAAAGCAC GCCAAGATAA AAAGTTTCAC TATGGAAATA CTAAAACGAA GCTCAAAAGT ATGGCTACAA GAGCTTCGTT CAAACCTAAA CACTTTCTGG GGAACAATCG AATCCGAAGT TACCAAAAAC GGCGCCGCTT CATATATCTT CCCTCTCCAA CGTTGCATCT TCAGTTTCCT CTGTGCCTCT CTCGCCGGCG TTGACGTTTC CGTATCGCCG GACATCGCTG AGAACGGTTG GAAAACACTC AATACTTGGC TTGCATTGCA AGTTATCCCC ACCACTAAAC TCGGCATTGT TCCTCAGCCG CTTGAAGAGA TTTTTCTCCA TACTTGGCCT TACCCTTCTC TCTTAGTCGC CGGAAATTAC AAAAAGCTTT GCAATTTCAT CGACGAGAAC GCCGGAGATT GTCTCCGGTT AGGTCAAGAA GAATTCGGGT TGACCCGAGA TGAGACGATT CAGAATCTTT TATTCGTGTT GGGTTTTAAC GCTTACGGGG GCTTTTCCGT CTTTTTACCT TTTTTGATCG GAAAAATCAC CGGCGATAAT TCCGGTCTCC AGGAGAGGAT TAAATCCGAA GTCAGGAGAG TTTGCGGATC CGAGTCGGAT CTTAATTTCA AGACGGTCAA CGAAATGGAG CTGGTTAAAT CGGTGGTTTA CGAAACGCTG CGTTTTAATC CTCCGGTTCC TTTGCAATTC GCACGTGCGA GGGAAGATTT TCAGATAAGT TCACACGATG CTGTTTTTGA GGTTAAGAAA GGTGAGCTTC TTTGTGGTTA CCAGCCGCTT GTGATGAGAG ACGCTAATGT TTTTGACGAA CCGGAGGAAT TTAAACCGGA CCGGTTTGTA GGTGAGACCG GGTCTGAATT GCTGAATTAT CTCTACTGGT CTAACGGTCC ACAAACAGGT ACACCGAGCG CTTCGAACAA ACAGTGTGCA GCTAAGGACA TGGTCACTCT CACGGCTAGC TTGGTCATTG CCGATTTATT TCTCCGGTAT GATTCGGTTA CTGGCGACTC CGGTTCAATT AAAGCTGTTG TTAAAGCTAA ATAG |
| Length | 1464 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 12069848.. 12072340 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G15440.1 |
| Description | hydroperoxide lyase 1 |
| TAIR curator summary | Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase. |
| Alias | [CYP74B2][HPL1][hydroperoxide lyase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg472193 | chlorophyllase 1 |
| 1.73205 |
Ahg490817 | elicitor-activated gene 3-1 |
| 2.44949 |
Ahg926592 | Kunitz family trypsin and protease inhibitor protein |
| 2.82843 |
Ahg926704 | Kunitz family trypsin and protease inhibitor protein |
| 3.4641 |
Ahg946577 | cellulose synthase-like A01 |
| 3.60555 |
Ahg484907 | lipoxygenase 2 |
| 4.47214 |
Ahg474366 | TSK-associating protein 1 |
| 4.58258 |
Ahg317230 | acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase |
| 5 |
Ahg936257 | allene oxide cyclase 1 |
| 5.65685 |
Ahg943255 | methionine sulfoxide reductase B6 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|