| Annotation |
|---|
| Description | jgi|Araly1|495409|fgenesh2_kg.8__1225__AT5G53370.1 |
| Sequence |
AGAGCCTTCC ACATCATCTT TGTTCCCATA ACAAACTCTT CTAAACCAAA AAAAAAAAAA AAACACGACA ATGGGTTACG ATAGGCTCGG TCCATCCGGA CCATCAGACC CGAACCAGAA GATCCCTGCC ACGTCAGTCC CGGAGCTACA GAAGAAAACT AAAACGAAGC TGATTCTCTT CACTTTGGCC GTTTTAGTCG TTGGAGTGAT CTGCTTCGGT ATCTTTGCCG GCATCCGAGC CGTAGGCTCG GGCAAAACCG AACCAAAACT AACCCGTAAA CCGACCCAAG CAATCTCCCG AGCCTGTAGC AAATCCTTAT ACCCGAACCT ATGTATCGAC ACACTTCTTG ATTTTCCGGG ATCTTTAACC GCCGACGAGA ACGAACTCAT TCACATATCA TTCAACGCAA CGCTTCAAAG ATTCAGCAAA GCTCTATATA CTTCTTCGAC GATCACATAC ACTCAGATGC CGCCACGTGT ACGGTCAGCT TACGATTCTT GCCTTGAGTT ACTTGATGAT TCAGTCGACG CGCTAACACG CGCTCTCTCC TCCGTCGTTG TTGTCTCCGG AGATGAGTCT CATTCCGATG TGATGACGTG GCTTAGCTCT GCCATGACCA ACCACGACAC TTGCACTGAC GGATTTGATG AAATTGAAGG TCAAGGAGGA GGAGTGAAGG ATCAAGTGAT CGGAGCGGTT AAAGATTTAT CGGAGATGGT GAGTAACTGT TTGGCGATAT TCGCCGGAAA AGTTAAAGAT TTGTCTGGAG TTCCGGTGGT GAATAATAGG AAGTTACTTG GGACTGAAGA AACAGAGGAA TTACCTAATT GGTTGAAGAG AGAAGACAGA GAGCTTCTTG GTACTCCGAC GTTGGCGATT CAAGCTGATA TTACGGTATC GAAAGACGGT AATGGAACGT TTAAGACGAT CGCGGAAGCG ATCAAGAAAG CTCCGGAGCA TAGTAGCCGT AGATTCGTCA TCTACGTTAA ATCAGGAAGA TACGAAGAAG AGAATCTGAA AGTTGGGAGG AAGAAGACAA ACTTGATGTT CATCGGTGAC GGCAAGGGTA AAACGGTCAT AACCGGTGGA AAAAGCATTG CCGATGATCT AACTACTTTT CACACCGCAA CTTTCGCTGC GACTGGTGCT GGATTTATAG TGAGGGACAT AACGTTTGAG AATTACGCCG GACCGGCTAA GCATCAGGCC GTGGCACTCC GTGTTGGTGG AGACCACGCG GTGGTTTACC GTTGCAGCAT AATCGGTTAC CAAGACGCTC TTTATGTACA TTCTAACCGA CAGTTTTTTC GCGAATGCGA AATTTATGGA ACGGTCGATT TTATATTCGG GAATGCAGCT GTGATATTAC AGAGTTGTAA CATCTATGCG CGTAAACCGA TGGCTCAGCA GAAGATTACT ATCACGGCTC AGAACCGAAA AGATCCGAAT CAGAACACGG GGATTTCGAT CCATGCGTGT AAGCTACTAG CTACGCCGGA TCTTGAAGCC TCTAAGGGTA GTTATCCGAC TTATCTCGGC CGTCCGTGGA AGTTGTATTC TAGAGTTGTG TACATGATGT CGGATATGGG CGACCATATT GACCCGCGAG GATGGTTGGA GTGGAACGGT CCGTTTGCAT TGGACTCATT GTACTATGGT GAGTATATGA ACAAAGGGCC GGGTTCAGGA ATGGGTCAAC GAGTCAAGTG GCCGGGTTAT CATGTTATTA CCTCAACCGT AGAGGCTAGC AAGTTTACGG TGGCTCAGTT CATTTCTGGT TCTTCGTGGT TGCCATCAAC CGGCGTGGCC TTCTTCTCCG GGTTGTCACA ATAGACTGCC TCGGCCTTGT ATGTAACGTA TACGAAAGAT TTTATGAACA AACTCAAGAT TTGTAATATA GTCCATAAGC CATTTTAAGT GTACTTATTG TAATGACAGG ACATCTTCTT GAATGAAATA AAGAT |
| Length | 1965 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14734330.. 14736385 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53370.1 |
| Description | pectin methylesterase PCR fragment F |
| TAIR curator summary | |
| Alias | [ATPMEPCRF][PMEPCRF][PECTIN METHYLESTERASE PCR FRAGMENT F][pectin methylesterase PCR fragment F] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg486620 | cysteine synthase C1 |
| 6.245 |
Ahg493531 | HXXXD-type acyl-transferase family protein |
| 7.2111 |
Ahg495675 | oligopeptide transporter 1 |
| 8.66025 |
Ahg495022 | amino acid permease 6 |
| 10.9087 |
Ahg491486 | cellulose synthase 1 |
| 11.6619 |
Ahg949817 | Protein of unknown function (DUF819) |
| 13.4164 |
Ahg934330 | ATP binding cassette subfamily B1 |
| 13.6015 |
Ahg921474 | |
| 13.7477 |
Ahg926134 | 3-ketoacyl-CoA synthase 6 |
| 14.7648 |
Ahg479351 | Eukaryotic aspartyl protease family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|