Detail



ID : Ahg495417

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495417|fgenesh2_kg.8__1233__AT5G53450.1
Sequence
TCGAGGCGCG ATGCCTCAGG CGTACTTCAT CACGCAACTC TCACGAGCTT CTCTGTCGTT ATATACGACT TTCTATTTTT CTTCTGATTT TCGAAAGAAT CAAACTTTTG AATTCTTCGT CTCGAGATCT CTCTTTATCT CTCTATCTGT TTGATTGAGG GTTTTTGTTG GATGGCACTT TGTGGTGTTT GTTCGACTCC AAATCTACCG AATTTGCAAG TGTTTCGTTC TGTTAGAAAC TCGAGCATTG GTTTGAAACG AAACCATAGT CTACGGCAGT CCACAAGTTC ATTTCGTGCA AAAGATGTGA GATTTAATTG TTCATCCTCC TTAAGACCGT CATCATCTAA TGTGGAGGAG ATAGATGAGG ATGTTGATAA TAATCCTTCG GTGTCGTTGG ATGGTGAATC AGCAAATGTG ATGCAGTTCA AGTGGTCTGA TTTCAAGATT CTTGATTGTG TTAGCATTGG TCATGGCGGC AGGGCCGATG AGCTTGTGTT TGAAGCTATA GTTCAGGTGC CAGATAGCCC TTTGTTTAAC CAAGGAGTTG TTCTTCGGAA ATTGAATACC ACTCGAGCTC AAAGAAGAGG AAGAAGAGCC ATCGAAGTGT TTAAAAAGCT AGTTCGTCGT AGACTTCTCT ACCATTCTTA CTCAATGCAA GTTCACGGTT ATATCACCAA TAACTTGAGC GATGATCAGT ACTCATTTAC CCTTGTACAT GGGTGCCATG GAAGTTTCTC GATTAGGCAC TGGCTTCAAC AATCTGATTG GCTTCCAACA TTAGAAGCTA CTCTTGCATT AGATGAAGAA TCTTTTAGAA GGGTCGGTGA TGATACAACT GGAGGGCCTG CAGTCTCGAG GCAGTTAAGA CTAATCCGTA TACTAATGAG GGATATTTTG ATTGGAGTCA ATTACTTGCA CAGCCATGGT CTTGCTCACA CAGAACTGAG ATTGGAAAAT GTGCATATTA GCCCTGTGGA TAGACATATC AAAGTAGGGA TTCTTGGAAA TGCAGCTGAT TTTAACGGGG ATGGTCCAAG TACTAGCAGC GCTTACAGTA CCATGGACAG ACGACAAATG ATGATAGCAT TTGACATGAG ATGTGTTGGA TTCATGATGG CAAAAATGGT ACTTCAAGAA TTGATGGATC CATTAATCTT TGCGAAATTG AAGTCTTTCT TGGCAAAGGG GAATGATCCT TCCTCGCTAC GAGAGTTCTT TGTGACGACG CTCAATACAA ACTCTGAATC TGGAAATACC GGAGTGCAAA TACTTGATAG AAACTGGGGA GCAGGTTGGC ACCTTTTATC TTCGTTAATT GCTACCAGAC CTTCTAAAAG AATAAGTTGC TTGGATGCTC TTAAACATCC CTTTCTATGT GGACCAAGAT GGCGTGTTGC CCCATCAATG GATATCATCA GATGGGGTCT TGGATCAACC GCAGTAAAGA TTTCAGAAGA ATACATTTAC CGCATGCCTC AGCGCCAAAG ACTTGCCCAC TTCATTGGAC TGATGGAGAT GCTAAATCCT TATCCAAAAC CAAACTGTTG GTTGGAGCTT TTACCGGGAA GATGGCGTCT GTTATACTCA ACCGGAAAGC ACATAGGTCT AACTCTGCGT CAGCCCTCAA CACGTGCCTT AATAGGCAAC GTTCACTTAA CGATAACTCG AGCTTCAGAA TCCGCAAACA ACACTTCGCT TTCCTTTACC TCTGATATAG GCTTCACTGC CATCACCAGC AAAGATTGGC CACACAACAA AATCGGAGCT ACTGGAAAAT TACAAACACT CTCTCAATTC AGATTAATAG CTGGAAAAAG ACTTTACCTC AAAGAAGAAA AAAAAAACAT TGGTAAGTTC TCAATGGGCG AACCAGATGC TGAAGAAGGT TTAGCCGAGA AGCTTGAAAC CGAGAAATGG AAAAAAGTAG TGCCCTTCAA GGAGTTTCCG TCGAGTCTTC CTGTAGCAAA ACTCATATCT GGAGATATTG AAGTGACGAT GAACATGAAT GATCGTATAG ATTCACCTGG GAGTGTGATT GGAGAAGTTA GGAAGCAAAT TCCGCCGGAA ATGTTCGATC TTTCTAAGCT TGTGTGTGGG ACTTACATAG ACAATAGGTT ACTTGTACTT AGGTGTGTAA ATGGTTCAGC ATTGTTGTTC ACAAGATCCA GCTTGGACCA TATGTCTATG TAGCCACTTG GATCGGTTCC TTATGTATAT AACAAATGTA TCATTCTTTT TTGGACTAAA CCTTGTAGTC TATGTGTATG TTGTGGTAAT AATGTTTGCT TTTGGCTTTG AGGTTGTAAT AAGAGCTTTT TAGTAGAAGC 
Length2330
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14787291.. 14790963
Download Sequence
A.thaliana
AGI-codeAT5G53450.1
DescriptionOBP3-responsive gene 1
TAIR curator summary
Alias[ORG1][OBP3-responsive gene 1]
Gene coexpression
MR
MR Locus Description
2 Ahg939945
4.89898 Ahg892333 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
7.2111 Ahg472552 ferric reduction oxidase 3
13.0384 Ahg913857
14.9666 Ahg938591
16.0624 Ahg909813 ferric reduction oxidase 1
22.1359 Ahg479327 zinc finger protein-related
24.8193 Ahg496866 natural resistance associated macrophage protein 4
36.9865 Ahg907524 glutathione S-transferase TAU 15
46.9042 Ahg493429 acireductone dioxygenase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression