Detail



ID : Ahg496866

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496866|fgenesh2_kg.8__2682__AT5G67330.1
Sequence
GTCACTTTAG TAGCAGCACC GATTTCGATT TTCTGAATTC CGACGGGCGG TTACCGGAAA ACATGTCGGA GACCGATAGA GAGCGTCCGT TATTAGAATC GGAGGAGAGG GCTTATGAAG AAACCGAGAA AGTTCTCATA GTCGGAATCG ACGAAGAAGA AGACGCTGAT TACGACGACG ACCCCGGAAA CTCTCCTAAA TTCTCATGGA AGAAGCTTTG GCTATTCACC GGACCTGGGT TTCTGATGAG TATCGCTTTC ATCGATCCAG GTAATCTCGA GGGCGATCTT CAAGCTGGAG CCATCGCTGG CTACTCTTTG ATTTGGCTCT TGATGTGGGC TACTGCGATT GGCCTTTTGA TCCAACTTCT CTCTGCTCGT CTCGGTGTCG CGACTGGTCG GCATCTGGCG GAGTTGTGTC GTGAAGAGTA TCCGACTTGG GCAAGGATGG TGCTTTGGAT TATGGCGGAG ATTGCTTTGA TCGGAGCTGA TATTCAAGAA GTTATTGGTA GTGCTATAGC TATCAAGATC TTGTCTAATG GATTGGTTCC TCTTTGGGCT GGTGTTGTTA TCACTGCTCT TGATTGTTTC ATCTTTCTAT TTTTGGAGAA TTATGGAATA AGGAAACTAG AAGCTGTGTT TGCTATTTTG ATTGCAACAA TGGCTCTTGC ATTTGCTTGG ATGTTTGGTC AGACTAAACC CAGTGGAACC GAACTCCTTG TTGGAGCATT GGTCCCTAAG CTCAGTTCGA GGACTATCAA ACAAGCTGTT GGTGTTGTGG GATGTATTAT CATGCCTCAC AATGTGTTCT TGCATTCAGC ACTTGTGCAA TCCAGAGAAG TCGATCCTAA AAAGAGATTC CGGGTCAAAG AAGCTCTCAA GTACTACTCC ATTGAATCTA CTGGTGCTCT TGCGGTTTCC TTCATTATCA ACGTCTTTGT GACCACGGTT TTTGCCAAGT CGTTTTACGG AACAGAGATA GCGGATACCA TCGGTCTTGC AAATGCTGGA CAGTACTTAC AGGACAAATA CGGTGGCGGG TTTTTCCCGA TACTGTATAT ATGGGCGATT GGAGTCTTAG CTGCTGGTCA GAGTAGTACC ATCACAGGTA CTTACGCTGG ACAGTTTATA ATGGGAGGGT TCTTGAATCT CAAGATGAAG AAATGGGTTA GAGCCTTAAT CACAAGAAGC TGCGCAATCA TCCCAACAAT GATTGTTGCG CTTTTCTTTG ATTCATCGGA TTCTATGCTC GACGAGCTCA ACGAATGGCT AAATGTTCTT CAATCAGTTC AGATCCCTTT CGCCGTCATC CCTCTGCTCT GCTTGGTCTC CAATGACCAA ATCATGGGCA GTTTCAAAAT ACAACCATTA GTCCAGACAA TCTCATGGAT TGTAGCTGCC CTTGTGATAG CCATTAATGG GTATCTAATG GTGGACTTCT TCTCAGGAGC AGCGACGAAC GTGGTTTTGC TCGTGCCAGT GATCATATTC GCAATTGCGT ATGTTTTGTT TGTGCTTTAC CTTATATCAC GAGGCATCAC GTACACTCCC TGGCAACTAG TGGCTTCACA TAAAGAACCA CAGAGGGATG ATGAGTAAGT GAAGGAAAAG CAAAGAGACC TTTTCATTGA AGAATAAGAA TAAGAGAGAT GAAACAAACA ATAGAAAGTT GGGTTTCAGT ATGGTAACAA TTTGTATAAT AGTGTTTTAT GGTTTTAGAA TATAGTTTTG GAAGAATCTG AACTGTTTCG TATCATTTGT GTAAGACTTC CGGCGTTTCT TTGAATTTTG GCA 
Length1793
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21013522.. 21015571
Download Sequence
A.thaliana
AGI-codeAT5G67330.1
Descriptionnatural resistance associated macrophage protein 4
TAIR curator summaryEncodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.
Alias[ATNRAMP4][NRAMP4][ARABIDOPSIS THALIANA NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 4][natural resistance associated macrophage protein 4]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg479327 zinc finger protein-related
7.07107 Ahg355122 oligopeptide transporter
10.6771 Ahg934210 Sucrose-6F-phosphate phosphohydrolase family protein
11.6189 Ahg903021 auxin transport protein (BIG)
14.4222 Ahg892333 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
16.7332 Ahg477656 alpha/beta-Hydrolases superfamily protein
19.7484 Ahg941688
22.1811 Ahg486249
23.5372 Ahg480836 H(+)-ATPase 1
24.8193 Ahg495417 OBP3-responsive gene 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression