| Annotation |
|---|
| Description | jgi|Araly1|495487|fgenesh2_kg.8__1303__AT5G54090.1 |
| Sequence |
ATGCAGACTT TAGCTTTCTG CAACAACTGT GCCTTAGTGA TAAGAAACTC TATCGGAAAC AGAAACAGAA ACAGAGTAAA TTTGAGTTTA ATCTCGTCTT CTTCTCCGAC TCTTGTTTGC CGTTCAAAGT CTAAATCTCA AACCGATAGC TTGAGGGTAT TGGAATGGGA CAAGCTCTGT GATGTTGTCG CTTCTTTTGC TCGTACTTCT TTAGGTCGTG AAGCTACAAA GAAAAAGCTT TGGTCTCTTG ACCAGAGTTT CAGTGAAAGT TTGAAGCTTT TGGATGAAAC AGATGCCGCC ATTAAAATGC TTGAACATGG TTCCTTCTGT CTTGACCTCT CCAGTATTCA TATCTCCCTC GTTGAATCGG GAATTCGGCA TGCTAAGAGG AGGCTTTCCT TACGAGCAGA CCAAGCACTT GAAATTGCTT CTCTTCTTCG ATTTTTCGAT ACGTTGCAGT TTGATTTGAA AGCTGCCATT AAGCAAGATG GAGATTGGTG CAAACGGTTT ATGCCTCTAT CTGAATTGAT AATGCACCCT GTGATAAATA GATCATTTGT CAAGTTGGTT GAACAAGTTA TAGATCCTGA TGGTACAATC AAAGATTCCG CGAGTAGTGC CCTGAGACAA TCACGTGAAC GAGTGCAAAC ACTTGAAAGA AAGCTGCAGC AACTGCTGGA TGCTATCATA AGGAGCCAAA AGGATGACGA ATCTGTCATG GTAGCGGCTG AAATTGATGG AAGATGGTGT ATACAAATGA GCTCGAATCA GCTAACTTCT GTTAATGGTC TTTTGCTTTC CAGTTATGCT TCTCTTTCAA TGATTTATTT TCATATTCTA TCTCTTGAAG GTAATATGTG TTTCAGTGGT TCAGGTGGAG GGACTGTGGC GGAGCCAATA GCTGCGGTCT CTATGAATGA TGACCTTCAA AGTGCGAGAG CATCAGTTGC AAAGGCTGAG GCAGAGATTC TTTCAATGTT AACTGAAAAG ATTAACGCTC GAGCAACTTA CAGTCGTGCA TATGGTGGTG CACATCCTGA TATATACTTG CCACCTGAAG ATGGGGTTGA ATCTTTGTCC GCTGGAGAAA ACTCACTGCA GAGTAACTTA TCCAGTGAGA AATTGCTTCC TAGAAAAGAG TGGTTGCTGT ATCTACCTAG ATGTTATCAT CCTCTATTGC TTTACCAACA CAAGAAAGGC ATAAGAAAGA CGCGGGAGAC GGTAAAATTT CATAAAACAG CAGACACAGT ATTATCAGGA ACTCCACCAA TTCCAGCGGA TTTCCAGATC TCTAAGGGCA CTAGAGTTTT GGTTATTACG GGTCCAAACA CAGGAGGTAA AACCATTTGC TTGAAATCAG TTGGACTCGC TGCAATGATG GCAAAATCAG GTCTTTATGT TCTAGCAACT GAATCTGCAC GCATACCTTG GTTTGACAAC ATTTATGCTG ATATTGGTGA TGAACAATCT TTGCTGCAGT CACTTTCTAC TTTTTCTGGT CATTTGAAAC AAATAAGTGA AATTCTCTCG CATTCAACAA GCAGATCACT TGTGTTGTTA GATGAAGTTG GAGCTGGAAC AAATCCGCTT GAAGGAGCTG CATTAGGGAT GGCAATTCTC GAATCTTTTG CAGAAAGCGG TTCTTTACTC ACGATGGCAA CCACACATCA TGGAGAGCTT AAGACGCTTA AATACAGCAA TTCCGCCTTT GAGAATGCTT GCATGGAGTT TGATGACCTG AACCTAAAAC CCACTTTCAA AATCTTATGG GGAGTACCAG GTCGTTCGAA TGCAATAAAC ATAGCTGAAA GGTTGGGGCT TCCATGTGAT ATCATCGAGA GTGCTCGTGA ACTCTATGGC TCTGCAAGTG CTGAGATTAA TGAGGTCATA CTTGACATGG AACGGTACAA GCAAGAATAT CAGAGACTTT TGAATGAGTC ACGTGTTTAT ATAAGGCTAT CAAGAGAGCT TCATGATAAT CTACTCACAG CACAAAAGAA CATTAACGAC CATGCCACCA AAGAGAAACG AAAAATGAGA CAAGAACTAA CTCAGGCTGG TTCGATGACT CGTTCTACAC TTCGCAGAAC ATTGCAACAG TTTCGCGCAT CTGCTGCACA ATCATCTCAG TCAAAGGTAG CTACGCAACT CCAAAAAAAA GTCGAAACGA CAAAGGATGA AGATAGTGGA ATTCGTTCAT CATCTGTGGT AGAGAGACGA CCAACTTCTG AAGCTGCCGC TCAAAAGGTT CCTGAAGTCG GTAGCTCGGT GTTCGTTTCT TCTCTTGGTA AAAAAGCGAC TGTTTTGAAA GTAGAACAGT CGAAGAAAGA GATCTTAGTG CAAGTAGGCA TCATGAAGAT GAAAGTGAAA CTGACTGATG TTGTAGCCTG AATCTAAATG GCACAGTTAT ATTCATAAGT ATCTAAACCA ACACCGTTAT ATTAGCTTCA GAGTACAAAT GATGTAATTA AAGTGATATG AAGAAATATT ACCTACTTAT TACATATGTA CTTGTTGTAT GCTTCTTTCT TATACAAGTA TATGGT |
| Length | 2546 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 15246702.. 15251190 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G54090.1 |
| Description | DNA mismatch repair protein MutS, type 2 |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg926183 | magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases |
| 12.9615 |
Ahg928292 | pyruvate dehydrogenase kinase |
| 15.6525 |
Ahg490566 | cationic amino acid transporter 9 |
| 17.0294 |
Ahg489422 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 20.199 |
Ahg473738 | |
| 21.6333 |
Ahg485391 | Protein of unknown function (DUF1162) |
| 22.2486 |
Ahg474701 | TBP-ASSOCIATED FACTOR 6B |
| 22.9783 |
Ahg317700 | ARM repeat superfamily protein |
| 23.0217 |
Ahg929841 | sodium:hydrogen antiporter 1 |
| 26.4575 |
Ahg943543 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|