| Annotation |
|---|
| Description | jgi|Araly1|495510|fgenesh2_kg.8__1326__AT5G54250.1 |
| Sequence |
TCTCTCTCTC TGTTGCATGC GTTAGTACTT TCGATGGCCA CAGAGCACGA ATCCACACGC GCATCACGCT TCTCACGTGA CTCAAGCAGC GTAGGATATT ACTCAGAAGA AGATAACACG GAGGAGGAAG AGGAAGATGA AGAAGAGATG GAAGAAATCG AAGAAGAGGA GGAAGAAGAG GAAGAAGAAG ATCCACGTGT AGGTCTCGCG TGCGGAGGAA GAAGAAACGG GTCAAGTAAT AACAACAAAT GGATGATGTT GGGTCGGATA CTTGACCCGA GATCCAAATG GGTTCGAGAA TGGAACAAAG TCTTTCTCCT TGTATGCGCG ACAGGTCTAT TCGTAGACCC ACTTTTTCTC TATACCCTAT CAGTGAACGA CACGTGTATG TGTCTCCTCG TCGACGGTTG GCTTGCTCTC ACCGTCACTG CCTTACGCTC CATGACCGAT CTTTTGCACT TATGGAACAT TTGGATTCAG TTCAAGATTG CTCGCCGGTG GCCTTATCCC GGCGGAGATA GCGACGGCGA TACCAACAAA GGAGGTGGGA CACGTGGCTC TACGAGGGTT GCTCCACCTT ACGTTAAGAA GAATGGGTTC TTCTTCGATC TCTTCGTCAT CTTACCATTG CCTCAGGTGG TGTTGTGGGT GGTGATACCT TCTCTTCTAA AGAGAGGCTC TGTGACTTTA GTGGTGTCAG TTTTGCTTGT AACATTCCTC TTTCAATATC TACCGAAAAT ATATCATTCA ATCCGCCATC TCCGCCGCAA TGCTACTCTC TTGGGTTACA TCTTCGGCAC CGTCTGGTGG GGAATTGCAC TCAACATGAT TGCTTATTTC GTCGCGGCTC ATGGAGCAGG AGCATGTTGG TATTTGTTAG GAGTTCAAAG ATCAGCGAAA TGTCTTAAAG AACAATGTGA AAACACAATG GGATGTGACA TAAGGATGTT GTCATGTAAG GAACCTGTGT ACTATGGAAC GACCGTAATG GTCCTTGATA GAGCTAGACT TGCTTGGGCA CAAAACCATC AAGCCCGATC TGTTTGCTTA GATATAAACA CCAACTACAC ATATGGTGCT TATCAATGGA CCATTCAACT TGTGAGCAAT GAGAGCCGGT TGGAGAAAAT CCTTTTTCCT ATCTTTTGGG GTCTCATGAC TCTCAGCACA TTTGGGAATT TGGAGAGCAC AACAGAATGG TCGGAGGTTG TCTTCAATAT CATAGTTCTA ACAAGTGGTC TTCTTCTCGT TACCATGTTG ATTGGTAACA TCAAGGTGTT TCTGCACGCA ACAACTTCAA AGAAGCAAGC AATGCACTTG AAAATGAGGA ACATAGAGTC GTGGATGAAG AAGAGACATT TGCCATTAGG CTTTAGGCAG CGAGTCCGCA ACTATGAGCG GCAAAGATGG GCTGCTATGC GCGGTGTAGA CGAGTGTGAA ATGGTTCAGA ACCTTCCAGA AGGTCTTAGG AGAGACATCA AGTACCATCT CTGTCTAGAC TTAGTCCGGC AGGTTCCATT GTTTCAACAT ATGGATGATT TGGTGCTTGA GAATATATGC GACCGTGTGA AGTCTCTCAT TTTCACCAAA GGAGAAACAA TTCAGAAAGA AGGAGATGCA GTGCAGAGAA TGTTGTTCGT AGTGAGAGGT CATCTTCAGA GCAGTCAGTT GTTAAGAGAC GGTGTCAAGA GCTGTTGCAT GTTAGGTCCG GGAAATTTTA GTGGCGACGA GCTTCTCTCG TGGTGTCTCC GACGACCCTT CGTGGAGAGG CTACCGCCGT CCTCTTCAAC GCTTGTAACA CTTGAGACCA CCGAAGCGTT TGGCCTCGAC GCCGAAGACG TTAAGTACGT GACGCAACAT TTTCGTTACA CTTTTGTTAA CGAGAAAGTC AAACGCAGTG CCCGCTATTA TTCCCCTGGA TGGCGGACTT GGGCTGCGGT TGCGGTTCAG CTCGCTTGGC GGAGGTACAA GCATAGGCTA ACGTTGACGT CACTGTCGTT CATAAGACCG AGAAGACCGT TGTCAAGATG TGCATCGTTA GGAGAAGACA AATTGAGGCT CTATACAGCA ATTTTAACCT CTCCTAAACC TAATCCCGAC GATTTCGATG ATTATTGATT C |
| Length | 2121 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 15404240.. 15408700 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G54250.1 |
| Description | cyclic nucleotide-gated cation channel 4 |
| TAIR curator summary | member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent. |
| Alias | [ATCNGC4][CNGC4][DND2][HLM1][cyclic nucleotide-gated cation channel 4][DEFENSE, NO DEATH 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.3205 |
Ahg471306 | MATE efflux family protein |
| 18.2757 |
Ahg471656 | purple acid phosphatase 3 |
| 18.3303 |
Ahg333029 | Acyl-ACP thioesterase |
| 18.4391 |
Ahg480634 | Auxin efflux carrier family protein |
| 19.105 |
Ahg475714 | AMP-dependent synthetase and ligase family protein |
| 28.5657 |
Ahg941792 | Alanyl-tRNA synthetase, class IIc |
| 29.5635 |
Ahg474533 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 30.282 |
Ahg324952 | Protein of unknown function (DUF1012) |
| 30.2985 |
Ahg490462 | TRICHOME BIREFRINGENCE-LIKE 26 |
| 42.1426 |
Ahg937417 | jacalin-related lectin 23 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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