| Annotation |
|---|
| Description | jgi|Araly1|941792|scaffold_602336.1 |
| Sequence |
CTCCTCCTCA AAACTCTGTG ATGAATTTCT CCAGAGTAAA CCTCTTCGAT TTTCCTCTTA GACCGATTTT ACTTTCGCAT CCCTCTTCTA TTTTCGTTTC TAAACGTTTT GTTACCAGAA CCTCTGCTGC TGTTTCTCCT TCTACCTTGC TTCCCAAATC AACTCAGTCA GCTCAGATTA TTGCCAAGAG CTCATCAGTA TCAGTACAGC CGGTGTCTGA GGATGCTAAG GAGGATTATC AGTCCAAGGA TGTTAGTGGA GATTCTATAC GGCGGCGGTT TCTCGAATTC TTTGCCTCTC GTGGGCATAA GGTGCTTCCA AGTGCGTCTC TTGTGCCAGA AGATCCTACT GTCCTGCTAA CAATTGCAGG AATGCTTCAG TTTAAGCCTA TTTTCCTGGG AAAGGTACCT AGACAGGTTC CTTGTGCAAC CACTGCACAA AGGTGCATAC GTACCAACGA TTTGGAGAAT GTTGGGAAAA CGGCCAGGCA CCATACCTTC TTTGAGATGC TTGGGAACTT TAGCTTTGGT GATTACTTCA AAAAGGAAGC CATAAGATGG GCATGGGAGC TGTCGACTAT TGAGTTTGGG TTACCTGCTA ATAGGGTTTG GGTTAGCATT TACGAAGACG ATGATGAAGC TTTTGAAATC TGGAAAAATG AAGTTGGTGT GCCTGTTGAG CGGATAAAGA GAATGGGTGA AGCTGACAAC TTTTGGACTA GTGGACCAAC TGGTCCTTGT GGTCCATGCT CAGAGTTATA CTATGATTTC TATCCTGAGA GAGGTTCTGA TGATGATGTT GATCTTGGGG ATGATACCAG ATTTATTGAG TTCTATAATT TGGTTTTCAT GCAGTATAAC AAGACGGAAG ATGGATTGCT TGAGCCCTTG AAACAGAAGA ATATAGACAC TGGTCTTGGT TTGGAACGTA TAGCTCAAAT CCTTCAGAAG GTTCCAAACA ACTACGAGAC AGATTTGATA TATCCAATCA TTGCGAAGAT CTCAGAGTTG GCGAATATCT CATACGACTC TGCAAATGAA AAGGCAAAGA CAAGTCTAAA AGTAATTGCA GATCACATGC GGGCAGTTGT CTATCTCATA TCAGACGGTG TTTCGCCTTC AAATATTGGC AGAGGTTATG TAGTAAGGAG GCTTATAAGA AGGGCAGTTC GGAAGGGGAA GTCTCTCGGA ATAAATGAGG ATAGAAATGG TAATCTAAAG GGAGCGTTTT TGCCAGCAGT TGCTGAAAAG GTGATAGAGT TGAGCACCTA TATTGATTCA GATGTAAAAC TAAAGGCCCC ACGAATCATT GAGGAGATTA GGCAAGAGGA ACTTCACTTT AAGAAAACTC TGGAAAGAGG AGAAAAGTTA CTTGACCAAA AGCTTAACGA TGCCCTGTCA ATTGCTGATA AAACTAAGAA TACGCCTTAT CTGGATGGAA AAGATGCGTT TCTTCTGTAT GACACATACG GCTTCCCGGT GGAGATAACC GCAGAAGTTG CTGAAGAACG TGGAGTCAGT ATAGATATGA AAGGTTTTGA AGTAGAAATG GAGAATCAAA GACGTCAATC TCAAGCTGCT CACAATGTTG TAAAACTGAC AGTTGAAGAC GATGCTGATA TCACGAAAAA TATTGCAGGC ACTGAGTTCC TTGGATATGA CAGTCTCTCT GCTCGTGCTG TTGTTAAAAG TCTTTTGGTG GATGGGAAGC CTGTGATAAA GGTGTCTGAA GGCAGTAAAG TAGAGATTCT GCTTGACAGA ACTCCGTTCT ATGCTGAATC AGGAGGTCAA ATTGCAGATC ATGGTTTTCT TTATGTTAAC AGTGATGGGA ACCAAGAGAA TGCTGTTGTT GAGGTAAGTG ATGTGCAGAA GTCTCTTAAA ATTTTTGTTC ACAAGGGCAC TGTAAAAAGT GGAGCTCTAG AAGTTGGCAA AGAGGTGGAA GCAGCAGTAG ATGCAGACAA GAGGCAACGA GCGAAGGTTC ACCATACAGC CACCCATTTG CTGCAATCGG CACTTAAGAA AGTAGTAGGA CAAGAAACAT CTCAGGCTGG TTCATTAGTA GCTTTTGACC GCCTGAGATT CGATTTCAAT TTTAATCGGT CCCTGCATGA TAACGAGCTC AAGGAAATCG AATGCCTGAT CAACAGGTGG ATTGGGGATG CTACACGTCT TGAAACAAAA GTCCTTCCTC TTGCTGATGC AAAACGAGCT GGAGCCATCG CAATGTTTGG GGAAAAATAT GATGAAAACG AGGTTCGTGT AGTAGAAGTT CCTGGTGTCT CCATGGAACT TTGTGGTGGC ACTCATGTTG GCAATACTGC AGAAATACGA GCCTTCAAAA TTCTCTCAGA ACAGGGCATT GCATCTGGAA TCAGGCGTAT CGAAGCGGTT GCGGGTGAAG CATTCATTGA ATACATAAAC TCACAGGATT CTCAAATGAC ACGTCTATGC TCGACTCTCA AGGTGAAAGC AGAGAAGGTT ATAGAGACAG TGGAGAAACT TCTAAAGGAA CTGCGTGCAG CTAAAAAAGA AGCCTCTGAC TTGCGTTCAA AAGCAGCGGT CTATAAAGCA TCTGTCATAT CGAAGAATGC ATTTACTGTA GGAACTTCAC AGACGATAAG AGTGCTTGTC GAGTCTATGG ATGACACCGA TGCTGACTCA TTAAAGAGTG CAGCTGAGCA TTTGATAACC ACGTTGGAAG ATCCAGTGGC TGTGGTATTA GGATCATCTC CAGAGAAAGA CAAGGTTAGT TTAGTTGCTG CATTTAGTCC AGGAGTAGTC TCTCTAGGAG TTCAAGCAGG GAAATTCATT GGCCCCATAG CTAAGCTGTG TGGTGGAGGA GGTGGTGGAA AACCCAATTT TGCTCAGGCA GGCGGCAGAA AGCCTGAAAA TCTCCCAAGT GCCTTAGAGA AAGCTCGGGA AGATCTCGTG GCAACTCTAT CCGAAAAGCT AGGGTGAAGC ACAACTTCAA AAGTGAACT |
| Length | 2979 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 9113011.. 9116873 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G22800.1 |
| Description | Alanyl-tRNA synthetase, class IIc |
| TAIR curator summary | A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. |
| Alias | [EMB1030][EMB263][EMB86][EMBRYO DEFECTIVE 1030][EMBRYO DEFECTIVE 263][EMBRYO DEFECTIVE 86] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg926998 | chloroplastic drought-induced stress protein of 32 kD |
| 7.61577 |
Ahg483819 | Pyridoxamine 5'-phosphate oxidase family protein |
| 7.74597 |
Ahg933590 | photosystem II subunit P-2 |
| 7.74597 |
Ahg944731 | ascorbate peroxidase 6 |
| 8.60233 |
Ahg478046 | GTP cyclohydrolase I |
| 10.0995 |
Ahg491107 | dihydroflavonol 4-reductase-like1 |
| 10.0995 |
Ahg930357 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
| 10.247 |
Ahg332145 | Phosphatidate cytidylyltransferase family protein |
| 10.2956 |
Ahg949899 | regulatory components of ABA receptor 3 |
| 10.583 |
Ahg485641 | alpha carbonic anhydrase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|