| Annotation |
|---|
| Description | jgi|Araly1|495551|fgenesh2_kg.8__1367__AT5G54730.1 |
| Sequence |
AACAACAGAT TTCTAAAACA ACTCTTAATC AGGTCTTCTT CTTCGCTCTC TCTTCTTCTT ATCCTCAAAA AATCTTTCCC CTTTTCTTGC TCCTTAACGT TTCCAAAGTC TTTATCAGAT TACTGCTTCG AGACTCTTAA TTCTTTTTTC TGGGTTTTTA ATATCTTCTA ATTCTTTTCA ATTTCAACAC AAATTTGTTG CTTTTAGGAT CGTTGATTCT ATCTTCTGGG TTTTTGTAAA AGTTCGATCT TTTTGTTTCT TTCTTGTTGA TTTGTGTGTT TCTTGCTTCG TGACATTTTC GAGTTTGCGT GTATTTTGTT TCTATTTTTA AAGATTCTAA TCAAATTTGT TCAATTTCGG TTTTAAAATT GCAATTTTTA TCTCTGCCCC GTCTTTCTCG GCGATTCATT TTTCTTGGAA ATATCTCAGG CGTCGATATA GAGAATAAAA ATCGAAACTT TGTTTCATTT GGAGGTTAAA GATCAAAGCT TTTTGGTAGT GAAGAGTCTC CACCATTATG AGGAAAAACG GTGACGGTTC TTCTCCGAAG TCGCCGGACG GAGTTATGTC ACGATCAGCT CGGAGTTCGT TTCGTGCTTT GTCTAATTGC CTTAAGGTGA TTTCTTCTGG TGCTTCTACT GTTGCTCGCT CCGCCGTATC AGCTGCTTCT TCCGCCGTTA GGGACGTTGA TTCTCATCAC GATCAGGTAC TATGGGCGGG GTTTGATAAT CTACAGAAAG AAGATGGAGA TACTCGAAGA GTTCTTCTAC TAGCATTTAA GTCTGGATTT CAAGTTTGGG ATGTTGAAGA TACAGAGAAT GTTCACGTTA TAGTTTCTAC ACATGATGGA CAAGCATTCT TTATGCAAAT GCTATTGAAT CCAATAAAGT CTGGAGCTTT AGATGACAGG TTTTATAAGA GCCGTCCTCT TTTGGCTGTG TGTGGTGATT CTTGGGAAGA ACATTCAAGT AAAAAGATCA GTTCTGATAA CTCCGGAAGT GAAACCGTGG CTACTCCTAC TAATGTCTAT GTCTACTCGT TAAAGTCTCA GTCTTATGTG CATACGCTGA AATTCCGGGC TACCATTTAT TCGGTTAGGT GCTGTTCTCG GATTGTTGCT GTACAACAAG CAGCTCAGAT AGATTGCTTT GATGCTGCAA CACTGGAAAT GGATTACAGG ATTGTCACTA ACTCCATTGT GTGTGGCTCC TCGGGTGTTG GATATGGCCC TCTTGCAGTT GGTCCAAGAT GGATCGCGTA TAGTGGAAGT CGTATTGCTA CCTCAAGTTC TGCAATTTTC ACTTCAGAAC TTCTCTCACT GTCATCATCA CCCAGTGTTG CACAATTTGC AAGAGACTCG AGCAAGCAGC TCGCTTCTGG GATAGTAAAT CTTGGAGACA AAGGGTACAA GTCATTGACT CGATACTGCG CAGAGGTTCT TCCCAATCCG TATATTCCTG GTTTGAAAAG CATTGGAGTT GGTAATGAGA ATGTGCCAGA TGCAGAGAGC ATAGGAATGG TTATTGTCAA AGATATCACA AACAAAAGCG TCATAACGCA GTTTAAAGCA CACAAGAGTC CGATTTCAGC TTTGTGCTTT GACCCAAGTG GCCTGCTTTT GGTGACTGCT TCGATTCAGG GGCACAATAT TAACGTCTTT AGAATAATGC CAACAATTTC TACAAGCAGA GCTGTGAAGA AAACGACTTT TGCCCATCTG TTCAGGCTTC AGCGCGGTTT TACTAATGCG GTGATACAAG ACATCTGTTT CAGCAGTGAT AGCAATCTAA TTGTGGTTAG CTCTTCAAGA GGGACAAGTC ATTTGTTTGA GATAAATCCT GAGAAAGAGG GGGATTCTCC GGTTCCTATG TCTGCAATCA GTAGGATAAG AAGCGGAAAC AGCAGCGGAT GGATTGGGAC TGTGAGCGAT GCAGCTTCTG CAGCAGCTGG AATGGTTGGA GGCTCTGTTC CGGGTACAAT CACATCCACT TTCTGTTACT GCGATGAAAA GAGTAACAAT AACTACTATG GTTCTGTTGC TGATATGTGC TCCAAGACGA ATCTTCTGGT TTTTGCTCCT TCTGGATGTA TGACACAGTA TGCATTACGG GAAAATGCGG CTGGTGCTGG TCATGAGACT GCTGCGATGA TGGGGTTTGA CTTTGAGTCA GGTATAGAGA CTGAAGGAAA ATTAGCGGTA GATCCAATAA GAAGGTGGTC CATAATCCAA AACCGATCTA GAAGAGAGAC GCAGGATCAC CACAGTGACA TATATGGAGG TGGAACATCA GTGGATTCTA AAAGCAAAGT GTTTCCGGAG GTTGTTAGAA AACAGAGTGT TGAGGAAGCT TGGAAAGTAA CTAAGAAAGG AACGACCCAT GTGGATGATA ATCGTCATTT GTACATATTT GAAGCAGAAC AGCAAACGCA TCTGCCGACT CAGCTACCGT TATGGGCAAG GCGAAAGTTT AGGTTTCAAA AATTGGCATT GAATCGGGGT GAAGATATTA GTGGTGGAGG AGGGGAGATG GAGATTGAAG GAATCCAAAC TCGAACAATT GAAGCAAGAA CAAGAGATTT GGTTCCAGTC TGGGGTTATC TCCAATCACC AAGATCCCAA CAAGTGACAA ACGAATCAAT GCAGAGTCCA AGTACCACTA CAGAAGATGA CAAAGTGGCT CCTCTGGAGG GTCATGGAAC AGAGACTGAT CTCGGGGCTG TACATAGTGA AGAAGAGACA CAAAGCGAGT CTGTAGATAA AGAAGGTATT GCAGAGGAAA AGAATCACAG TGAAGATGAG GATGAAGAGC AAGTGGATTA GAAGATTGGT TTATTTTTTT CACACAAACT CGGCTTCAAC AACAGAATAA CAAAAAAATA ACTCTGGAAA ATTGTATAGA AAAGAAAAAG GAAAATTGAC ATATCTTTTA GATGTAAATA GCTTTAGTAC TTTTTCTTCT TTTTTTACAA AATATTATTA GCCCATTGAT TCATGAACC |
| Length | 2999 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 15708495.. 15712136 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G54730.1 |
| Description | homolog of yeast autophagy 18 (ATG18) F |
| TAIR curator summary | |
| Alias | [ATATG18F][ATG18F][G18F][ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) F][homolog of yeast autophagy 18 (ATG18) F] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.94987 |
Ahg483191 | glutamate synthase 2 |
| 12.8841 |
Ahg487613 | Plant calmodulin-binding protein-related |
| 13.6748 |
Ahg493865 | |
| 20.7846 |
Ahg905161 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 24.7386 |
Ahg475482 | Arabidopsis thaliana protein of unknown function (DUF794) |
| 29.9666 |
Ahg496280 | glucuronidase 1 |
| 43.4511 |
Ahg311800 | Neutral/alkaline non-lysosomal ceramidase |
| 51.4296 |
Ahg930437 | AMP-dependent synthetase and ligase family protein |
| 59.6992 |
Ahg909961 | |
| 60.1166 |
Ahg493429 | acireductone dioxygenase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|