Detail


ID : Ahg909961

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909961|Al_scaffold_0001_215
Sequence
ATGATTTTGG TGAGTAGTAG CGATGCTAGA AGCGAATTAG GGTTAGGGTT TGGTGGATTA GGTGAAGAAA TCATGCAAGA TTGTGACTTT GAGGAAGAAA GCACACATTC TTATGTTTCT TGCGTTGACC CAGATGTTGC TCTCTCTTAT ATCGATGAGA AACTTGAAAA CGTCTTGGGA CATTTTCAGA AAGATTTTGA AGGTGGAGTT TCAGCTGAAA ATTTGGGTGC AAAGTTTGGT GGCTATGGTT CCTTTTTGTC TATGTATCAG AGATCTCCTG TTTCTTCACG TCCTAAGACT CCACCAGATG TTCAACAAAA CCAATTGGGG GGTCGATCTA ATTGCTCAGC TTCATCACTT GTACCTCAAC TATCAATATC CGGATCCTCT TCGAAACCTC CTGCCTCTGA TGTTTTCGTC AAATTAAAAA AGTTCGTCAA ATCAAGTAAT ATAGGGACAC CTGATAGCAA ACAAAAACCT GACACAAAAA TTTCTTCTTC TGCTCCATCA AATCATAAGA CTCTCAGACT TCGTATAAAA GTTGGTTCGA GTGACCTCTC TTCACTCAAA AACGTTTCTA CCTATACTAA AGAAGGCCTC AATATGCTAC CATCAGCATC GCGGGTGAAT TGCCTTTCAG AAGTTGAACA AGACTTACTG AATGGGATTT GTGATTCACC GACTAAAATT CTTATGGCTA TGGTGTCATT CCCTTTGCAT AAAGATCAGC TGTTATCACC TCTCTCTGAT GATCTTATTT TGTTGGGATC GAAAGAAAAG ATTTTCAAAG ATGCTGGATA TGGTTCTGCA AACAAGTCGG ACTCAAAAAG TACACCCGAT GATTTGGTTG TTTCTGATTC ACAAAAGCGT GCTGGTAAGT TTTCCATTGG GAAGAAGGAA AAGTTAAGGG ATAGGGTAAA GTATAGGCCA CCGTCAAACA AGCGTGACAG AAATCATACT GTATCCAATA CTGAAAAAGA GGCTGACAAA GAGTCCTGCG AGGAGCTTGT TTCCAAGACT ATGAAGCTTC CACTTTTATC CTGTCTATCA CCGTCATATA TCCACCCAGC AAAAGAGATT GATAAAGTAT CAGATTCTAA TGTGGAGGTT ATATCAAGAG GAACGAACAA AGATGCAGCT TTGATGGGTT CAAAGCCGGA ACTAGAAGAT AATGTAGTGG CATTTTCAGA TCGAAGCGTT AAGGAAACTG AAAGTATTAA CGTAAGAAAA GACGTTTACC TGATAAAAGG TGAACCTCTA AACTCATTGG AAAGTAATTC CAAGAGGGAG AAAGCTCCAA GTATTGAACA TGTAGATTAT TCTTCTGTGG TTAAGGGTAG TCAGAGTGAG ACAAGGAATG AAGAGCAAAT TTTAAAGTCA AAACTGCCTA AAGCACAGAA GTCACAAAAA AGTTCAAGCT CCATTGTTTC CATGAATAGT CTGAGAGGCA AGGACGCGGC TGTAAATATA ATTAAGAAGA ATGTACCAGA TAAATTGCAG GAAGATATTG GAGAATCCGA ACACATGTAT AAGGGATTCT TTGGTGATTC GAAAGAATCA AAAGAAGAAA AACAAAGTAG TCCGATACTT AAAGCTGAAA AAGCAAAGCT TTCAGAAGAA AATGCATTGG AGGAGAGTTT CAACAGTGTT AAAAATGATG AAGAGGCTTG TGACCATCTA AATTTGGTAT GTGAACCTGA TTTGAAACAC CTTATTAAGC CGAGTGACTT GAATGAAGAT AGGCACACCA CTAAGCAGAG TGTTAGACGG GAAGTGAAAA ATAAGCATTC TCTTGAAGGA GGAATGGAGA ATATGGGAAT GGAATCTGAA AGGGAACTTT CTGGGGTTTC TAAGAAACCA AAGACTGGAA AATCACGATT TTCCACTTTA GATCAACCTG GATCCAACAA ATCCAACCAA ATTCTGGACG TTTTAGATAC TAACAAAACT ATGATTACTC AAGCCTCAGC CGAAAATGTC AAGGATTTTG CTAAGGCTTC CTCGCATGGC GAACGTGATG ACAGAAAGAG GAAACTGAAG GAAAATGAAG AAAGTGGAGA TTGTATGAGA CCTAGAGAAG CTGCAGTAAT AGAGTCAAGT GGAGAGAACG TTAGAAAAAG TAAGAGGCTT AAAGGTTCAA GTTGTGATGA AAAAGAGTTG CCTTTTAGTA GTGAAAGCTG TGATAAGGAA AGAAGAGTTA GTCAAGAAAA TGGTAGAGAT TGTGCTTCCC ATCTACCTTT TATAGCGTCC TCTCCGATTT TGTGTAAGGA TTTGGGCTCT GAAATTATCA AAAATAATGT CTGCGAAGCC AAAGGTTCAC TAGTTGAATC AGTTGCCCCT TCGGCCTTGA GAGTGTTAGA CTCAGGTGAG CTTAAATCAG GAAGAATTTC AGAGAGGGAT GAATACCATG ATGCTGATTC TAATACTGGT GATACGTTAA AAAGATGCCG AGATGGTGAG GCTTATAGCA CTATCGATAG ACCAGGGACA ACAAAGAAGG CTGCAGAAAA TTCCAAGGAT AGAGAAAGAG CATATGGTGA AGATTGTTCA ATTGAAAACT TTAAACCAAA GAAGTCAGGG AGATGTCCTG GTGAAAATTG CATAGAGGGT GGCTCTAAGC AAAAGAGTAG GGAAGAGGGG TCATCTGCAC CTTCGAAAGA GAATAACTGG GGTCTGGTGA ATGACGTGCA AGATCTTGGC ACTGCTGTTA AAGTAAAAAG AAAAGAAAGC AGGAGCAAGA AAAGACCTGC TAGAAAAGTG TCTTTGGAGA GTAATAAAGA AGACTCAAGG GAATATCAAG ATCCTAATAC TAAGCTAGAT AGAAGTAGTA GTCATTTTTC TTCTCGACAG AAACCTGATA CAGCAAACAC TTCTCGTGGG AAAAGCAACC CATTGGAAGT GACCACTGAG AAATTAAAGA ATAAATCAGC TTCACCAGCT GGCACAGATC AGGTTGAAGT CTTGGGTCAC GGCACTGAGA TATCAAATAC AAAGAAACAG AGACTGCGGA ATGATAATCA CAGTGTGACC CACGATGAAG GTTCGCGAAA CCAAAAGCAA AATGGAAGTA GGCATAAGGA TCATGTTGGC TTAAGCCCTT TGAAAAAGGA ATCCACGAGT CAGACTGCCT CCAACTCAAT CAAAGAGGCT ACAGACTTGA AACACATGGC TGATCGTCTT AAGAATGCTG TGTCCAATCA CGAGAGCACA GGTGTTTACT TTCAGGCAGC TCTTAAGTTT CTTCATGGTG CCTCCCTTTT GGAGTCATCT GGCATTGATA ATGCTACACA TAAGACCATT GCCAGATCCA AGGATATTTA TGGCAGCACA GCAAAACTTT GCGAGTTCTG TGCTCATGAA TACGAGAAAA ATAAAGATAT GGGGGCTGCT GCTCTGGCTT ATAAATGTAT GGAAGTAGCT TATCTAAGGA TAACTTATAC CTCCCATGGT AACATAAGAA GATACAGATA TGAGTTGCAA GCAGCTTTGC AAGTGATTCC TTCAGGTGAA TCTCCTTCCT TTGCTTCTGA TGGTGAAAAT TCAAACCACA CATTGGCAGC GGAAAAGTTT GCTTTGTCCA ACAATGTGAG ATCATCCCCT AGCGTAACCG GAAACCATGT TATCTCTTCA GGAAACAATT CCTCTCTTTC ACAGCTTTTG GCATTTTCGC AAAACGTAAG CTCTGCTATG GATGCGTCAA GAAAAGCGCA GATTGCATTA GCAGCTGCAA AGGGAAAATC GTATGAAACC AGATACAGTA GTGATGGTAT AACATGCATC AAAAGGGCTC TTGACTTGAA TTTTCAGGAC ATGGAGAAAC TGTTGCATGT GGTGAGGCTT GCAATGGAAT CCATAAACCG GTGA
Length3864
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G02990.3
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg942216 chloride channel D
6.85565 Ahg340056 Chaperone DnaJ-domain superfamily protein
7.28011 Ahg890756 Pre-mRNA-processing-splicing factor
7.34847 Ahg471118 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
9.38083 Ahg489733 OSBP(oxysterol binding protein)-related protein 1C
9.84886 Ahg890815 membrane-associated progesterone binding protein 4
10.5357 Ahg478080 Protein of unknown function (DUF3755)
11.1355 Ahg470975 nuclear factor Y, subunit C9
13.1909 Ahg496588 DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases
13.5647 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression