Detail



ID : Ahg495890

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495890|fgenesh2_kg.8__1706__AT5G57900.1
Sequence
AAAACTAGAA TCTTCATGGA GGAAGACGGG TCTGATTGGG GCGGATTGGC TCCAGAGATA CTCATCAACA TCATCTCAAG GCTCACGATT CAGGAGCTAT GGACGGGTCC GATGTTCGTC CGAAAATCGT GGCTAACTGT TTGCAGAGAT CCGTATCTCT GGTCTATCTT CGATCTGGAA CCATGGTTCG AGTCATATCC CGAGTCGACT CACTTGTGGT CCCCTGATTT CGAGGGGAAG GTAGACTCAA TGCTCCGATC AGTCGTTGAT TGGAGCGATG GTGGTCTAAC CGAGATCCGC GTCCGCCATT GCAGCGACCA CGCTCTCTCT TACGCAGCCG ATAGATGCCC AAATCTACAG GTTCTTGCCG TTAGAAGCAG TCCAAACGTG ACAGACGCAT CTATGACGAA GATAGCGTTT CGGTGCAGGA GTCTAAAGGA ACTTGATATC AGTTACTGTC ACGAGATATC TCACGACACT CTTGTGATGA TTGGTAGAAA CTGTCCTAAT CTGAGGATCT TGCAACGTAA CCTTATGGAC TGGTCTTCTC GGCACATTGG CTCTGTTCCT ACAGAGTACT TAGACGCTTG TCCTCAAGAC GGAGACACAG AAGCTGATGC GGTTGGGAAA CATATGATCA ATCTAGAGCG TTTGGAGATT CAGTTCTCTA GATTATCTGT CAAGGGTCTT GCTTCTATAT GTGAGGGTTG TCCCAAGCTA GAGTACTTGG ACTTGTTTGG CTGTGTGCAT TTGTCAAGCC GTGACATTAC AAGCAATGTT TCAAGGCTTA AATGGCTTAA GGAGGTGAAG AAGCCAGATG TTTATGTGCC AAGGTCAGGA GATGTGGCTC AAACAGAGAG GTATGGACAT TGGAGACTCT ATGATGAGAG ATTTGATATA CAAGCCATGA GGATCTGATA TAATAAAGCA GCCCATAGTT CTGACTTGGG TAGATTGTT 
Length959
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17240533.. 17241612
Download Sequence
A.thaliana
AGI-codeAT5G57900.1
DescriptionSKP1 interacting partner 1
TAIR curator summaryF-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner
Alias[SKIP1][SKP1 interacting partner 1]
Gene coexpression
MR
MR Locus Description
11.8743 Ahg472406 DPP6 N-terminal domain-like protein
16.9115 Ahg488679
17.7764 Ahg473866 Granulin repeat cysteine protease family protein
18.4391 Ahg472192 Wound-responsive family protein
26.1725 Ahg495950 with no lysine (K) kinase 4
27.6406 Ahg913087 PLATZ transcription factor family protein
30 Ahg491851 Phospholipase A2 family protein
31.305 Ahg492884 alpha/beta-Hydrolases superfamily protein
31.5595 Ahg926058
35.0999 Ahg472378 F-box/RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression