Detail



ID : Ahg496089

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496089|fgenesh2_kg.8__1905__AT5G59550.1
Sequence
ATGCCGTCAA CGCCGACGAC GACGTCTACA ACAACGCCGA TCACGGCTTC GTATTGGTGT TATAGCTGTA CGCGTTTCGT CAGCGTTTGG GCTGATCAAG GCACAGCCAC CGTCGGTGGC GTCGCTTGTC CTCACTGCGA CGGCGGTTTT ATCGAAGAGA TTAACGATTC TTCCTCCGCC GCTACCGAAT TAGCGATTCC GGCTTCTACT GAAGTAAGAT CGATTAATAA CAACCGTAGA TCCGTGATTA GACGCCGGAG ATCCGGTCGT CGTCCGTCGT TTAATCCGGT CATCGTACTC CAAGGAGGCG CCGGCGAGAG AGAAGATGGA GAAGAAGGAG ATGCGGCTAG AGATCGACGC GCTTTTGAGT TTTATTACGA TGACGGATCC GGATCGGGTC TTAGACCGCT TCCGGATTCT GTATCTGAGA TCTTGATGGG ATCTGGATTT GAGCGGTTAC TCGAACAGCT AAGCCAGTTC GAAGCGTCGG CCACCGGAAT CGGTAGATCT GGAAATCCTC CGGCGTCGAA ATCGGCGATT GAGTCTTTAC CTAGAGTCGA AATCTCTGAT TGTCACATAG CCTCGGAGGC TAATTGCGCT GTTTGCACGG AGATTTTCGA GGCGGAGACG GAGGCACGTG AGATGCCGTG TAAACACCTC TTCCACGACG ATTGCATCGT GCCTTGGCTA TCGATTCGAA ACTCTTGCCC CGTGTGCAGA TTCGAGCTAC CTTCAGAGCC TAATCGACGG AGCAACAACA ACGAGGAGGA TAACGCCGTG GGGATGACAA TTTGGAGACT CCCCGGTGGT GGATTCGCCG TCGGGAGGTT TAACGCCGCA ATGAGAGACG GAGAGAGAGT TTTACCTGTG GTGTTAACAG AAATGGACGG TGGTGGGATT GGTAATAGCC AGGACGGTCC TAGACGGATC TCATGGGTTA GGTCACACGG TACACTCGAA TCGGATAGCA ACGGTGGTGG CTCCGGTACT GGCTCCGGCG GTAGATTGAG AAGGATGGTT CGTGGAATGG TGTCGTTAAT GAGGAGAGTG AGACCAAATC GTAGCTCTTC TTCATCTGCT GCAATTTCAT CTTCTTCTGA TAATCTGGAT TTGAACATTG AAGTAGAATC TAGGGTTTTG GATAGGTCGA ATTCAGTGAT GAGAAGATAC TTCAGGAGAA ACAGAAGTAA CAGAGATTCT TCTTCTTCGG TTCTTCATTG ATTGAGAACT ATATATATTA TTTTTTGGTT TGTTCATTCA ACAATGTAAA TATAAAATTC AGAAGAAAAA GATTGGTGCT TCGTTTTCTG TTATTATCAA TTCGATTATG TTACATCAAA ATGTCTAATG TTCGTAAAGA AGTGTTC 
Length1367
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17984292.. 17985658
Download Sequence
A.thaliana
AGI-codeAT5G59550.1
Descriptionzinc finger (C3HC4-type RING finger) family protein
TAIR curator summary
Alias[AtRDUF2][RDUF2][Arabidopsis thaliana RING and Domain of Unknown Function 1117 2][RING and Domain of Unknown Function 1117 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
6.245 Ahg481111 uncoupling protein 5
6.78233 Ahg486038 salt-inducible zinc finger 1
14.4914 Ahg488600
14.7309 Ahg483040 ortholog of sugar beet HS1 PRO-1 2
14.8324 Ahg472978 salt tolerance zinc finger
14.8997 Ahg940069 NDR1/HIN1-like 3
17.2337 Ahg473051 ERF domain protein 11
18.5472 Ahg477161 WRKY DNA-binding protein 40
19.0526 Ahg479472 zinc-finger protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression