Detail



ID : Ahg483040

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483040|fgenesh2_kg.4__2100__AT2G40000.1
Sequence
AAAAAAAAGA AATGGTTGAT ATGGATTGGA AGAGGAAGAT GGCATCATCA GATTTACCAA ACTCACCTAA GCTTTCTTCA AAGCTTCACG TAACTATTCC ATCACCATTC AAAATCGTCC CTGTTTCGTC TCCGATCTCT TGTTCCGCAC CAGCGCTTTG CTCTGCTTAC GAGCTTTACC TTCGTCTTCC TGAGCTAAGA AAGCTCTGGT CATCTCGTGA TTTTCCTACG TGGACGTCAG AGCCGATTCT TAAACCGGCT CTTCAAGCTT TGGAGATCAG TTTTAGATTA GTTTTCGCCG TTTGTTCTGA TACTAGACCG TATATCAACC ACCGTGAATG GAACCGGAGG CTAGATTCTC TCGTCACGAA GCAGATCCAG CTTGTAGCAG CGATCTGCGA AGAAGACGAT GAAGAAGAAG GTGACTCGGA GGTTCCGGTC AGCGATGGAC GGAGTTCGTT GAGTTTGTTA CCGCAGCTAG CTACGTGGAG GAGATCGGAA GCTTTAGGGA AGAAGATCTT ATCTACGATC GATAACGAGA TGAGTCGGTG TAAGTACACG CTTGGACTCG GTGAGCAAAA CATCGCCGGA AAACCAAATC TCCGGTACGA TGCGATTTGC CGACCTAACG AGATCTATAG CCTCAAGGAT AATCCATTCG CAGATCATAT CGATAATCAA GAGAATCAAA CGCTCTATAT CATTCACCAG ATCCTCGAAT CGTGGATCTA CGCATCTGGA AATCTTCTGA ATCGAATCGT CTCCAGTATC GAAGAAGAGA AATTCGAAAA AGCTTCTAAC GATGTTTACT TGCTGGAGAA GATCTGGAAA CTTTTAGCGG AGATTGAAGA TCTTCATATG TTGATGGATC CGGAGGATTT TCTGAAATTG AAGAAGCAGT TACAGATCAA ATCGACGGGG AAAAACGATG CGTTTTGTTT CAGATCTAAA GGGTTAGTGG AGATGATGAA GATGTCGAAA GATCTGAGGC AGAAAGTACC GGCGGTGTTG GCGGTTGAGG TAGATCCAAC CGGAGGACCG AGATTGCAAG AGGCGGCGAT GAAGCTTTAC GCGACGAAGA GAGAGTGCGA TAAGATTCAT CTGCTTCAGG GGATGCAAGC GGTTGAAGCG GCGGCGAAGA GTTTCTTCTT CTCGTATAGG CAGCTAGTGG CGGCGATGAT GGGAAGCGCG GAGACGAACG CGACGGCGAG TCAAGAGTCG TGTGACTCGT TGAGTCAGAT ATTTATGGAG CCGACGTATT TCCCGAGTCT TGACGCGGCA AAGACTTTCT TGGGAGAGTT CTGGAGTCAT TTGGGATGAT TCATTTTAAA TTATTTAAAT TGGTGGTTTG GTTAATTTAG TTTGTAAGAT ACTGAAATTT TTGGAACATT TGACGATCCA TATTTGAATA CAAATTCATT 
Length1420
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18451270.. 18452695
Download Sequence
A.thaliana
AGI-codeAT2G40000.1
Descriptionortholog of sugar beet HS1 PRO-1 2
TAIR curator summary
Alias[ATHSPRO2][HSPRO2][ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2][ortholog of sugar beet HS1 PRO-1 2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg486038 salt-inducible zinc finger 1
1.73205 Ahg950731 C2H2-type zinc finger family protein
3.16228 Ahg472978 salt tolerance zinc finger
3.4641 Ahg482563 plant U-box 23
5.2915 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
5.65685 Ahg481911 Protein phosphatase 2C family protein
5.91608 Ahg908965 nudix hydrolase homolog 21
6 Ahg479472 zinc-finger protein 2
6 Ahg940069 NDR1/HIN1-like 3
6.32456 Ahg950146 Translation initiation factor SUI1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression