Detail


ID : Ahg496166

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496166|fgenesh2_kg.8__1982__AT5G60300.2
Sequence
GTCAGAATAT TTTGAAAACC ACGTTGAAGC TTTATAGTTA TCTTTTTAAT ATAATCGTGT TAGTGGAGTA CAGTTTGTAA AGCAAAGCTT GCGAGGTGCA CCGTCTTGAG TTCCACATCA GATCCAGACT CTCTGGTTCA TCATCTGCAA TGGCTCGTTG GTTGCTTCAG ATCCTGATCA TCTCTTCTCT TCATCTGATT TCTCTATCAA GTCAACAAGA GACAAGCTTT GTCTATGAAA GCTTCCTCGA CCGACAAAAT CTTTATCTTG ACAAATCTGC AATAGTACTT CCCAGTGGTT TATTGCAGCT TACGAATGCT TCAGAGCACC AGATGGGTCA TGCTTTCCAC AAGAAACCAA TTGAGTTCAG TTCATCTGGA CCACTCTCTT TCTCAACACA CTTTGTGTGT GCTCTGGTGC CTAAGCCACG TGTTGAAGGC GGCCATGGTA TTGTCTTTGT ATTATCTCCT TCTATGGATT TCACGCACGC AGAATCAACT AGATACTTGG GGATTTTCAA TGCTTCAACA AGTGGATCTT CCTCTTATCA CGTACTTGCT GTTGAGCTTG ACACTATTTG GAACCCAGAT TTCAAAGATA TCGACCACAA TCATGTGGGG ATTGATGTGA ACAGTCCTAT ATCTGTCGCA ATAGCTTCAG CATCTTACTA TTCCGACATG AAAGGGAGCA ACGAAAGCAT AAACCTTTTA AGCGGAAACC CTATACAGGT TTGGGTGGAT TATGAAGGCA CTTTGCTCAA TGTGTCGATT GCTCCTCTTG AAGTCCAGAA GCCAACTCGA CCTCTTTTAT CACACCCCAT CAACCTTACA GAACTTTTTC CAAATAGATC AAGTCTGTTT GCTGGGTTCT CTGCAGCAAC AGGGACAGCG ATCAGTGACC AATATATTCT CTGGTGGAGT TTTAGCACAA GCAGAGGATC GCTGCAGCGA CTTGATATCT CAAAACTTCC TGAAGTTCCT CATCCTAGAG CTCCACATAA GAAAGTATCT AGACTGATTA TTCTTCTGCC CGTTTGTCTG GCTATTTTGG TGTTGGCTGT TCTTGCAGGG CTTTATTTCC GCAGGAGACG CAAGTATTCA GAAGTATCTG AAACATGGGA AAAGGAGTTT GATGCGCATC GGTTCTCTTA CAGGTCCTTG TTCAAAGCAA CAAAGGGGTT CAGCAAAGAT GAATTTCTCG GAAAAGGAGG TTTTGGAGAA GTTTATAGAG GAAATCTGCC ACAAGGCAGA GAAATAGCAG TGAAGAGAGT GTCCCATAAT GGTGATGAAG GTGTGAAGCA GTTTGTGGCT GAAGTCGTGA GCATGAGATG TCTGAAACAC AGGAATCTTG TACCACTGTT TGGGTATTGC AGAAGAAAAC GAGAACTTCT TCTTGTCTCA GAGTACATGC CCAATGGTAG TCTTGACGAG CATTTGTTTG ATGACCAGAA ACCGGTTCTT TCTTGGTCAC AAAGACTTGT GGTTGTTAAG GGTATAGCCT CTGCTCTCTG GTACCTGCAT ACAGGTGCTG ACCAAGTTGT TCTACACCGA GATGTCAAAG CTTCCAACAT TATGTTAGAC GCGGAGTTAA ATGGAAGGTT AGGGGATTTT GGCATGGCCA GGTTTCATGA GCACGGAGGC AATGCAGCTA CAACAGCAGC TGTGGGAACT GTAGGGTACA TGGCGCCGGA GCTAATCACA ATGGGAGCTT CCACTGGAAC TGATGTTTAT GCTTTTGGTG TTTTCATGCT TGAAGTAACC TGTGGGAGGA GACCTGTGGA ACCGCAGTTG CAAGTTGAGA AACGACATAT GATCAAATGG GTTTGTGAGT GCTGGAAAAA GGATTCTTTG CTTGATGCTA CTGACCCGAG ATTGGGAGGT GAATTCATAG CCGAGGAAGT CGAGATGGTT ATGAAACTGG GTCTGCTCTG TTCAAATATA GTGCCAGAAT CCAGACCAAC AATGGAACAA GTGGTCCTTT ACCTAAACAA AAACCTACCT TTGCCAGATT TCTCTCCATA CACTTTGGGG ATTGGCACAT TTGCTCCTGT TCTGGTTGAT GCATCCTCCC TTGTAGTCTC ATCTGCTTCA TGGAGTTGGT CAGGTCCCTC GATGTCTTCT TCCTCGGCCA ACCATTCACC TTATGCTTGT CAGTCAACAG ATCAGCCATG GGGACAGACA ATAGACACTA AGAACTCTCT TCACATAGTT GCAGAACCAG AGAAGCCCTC ACCCGCTGTC AAAACGGTCA CATTGCCTGC AGAAGATCAT CAGTCCAATA ATTCCAGCAT CAGCAGTCAG AGGTAAATTC GTGATGTACA TATCAAGCAA GCAGATATCA TTAGCTCTCA ATATTGTTTC ATATGTCTCA CTTGTCCCAA CAAAATCAGT TTGTTCATTG TATAATC
Length2407
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18290881.. 18293398
Download Sequence
A.thaliana
AGI-codeAT5G60300.3
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summaryLectin Receptor Kinase involved in protein-protein interactions with RGD-containing proteins as potential ligands. Role in cell wall-plasma membrane adhesion.
Alias[LecRK-I.9][lectin receptor kinase I.9]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg494671 casein kinase I-like 8
9.64365 Ahg492344 SUMO-activating enzyme 1A
13.8564 Ahg943492 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.6716 Ahg482471 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
23.9792 Ahg495150 Protein kinase superfamily protein
24.3721 Ahg487754 ethylene induced calmodulin binding protein
26.3059 Ahg488823 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein
34.0588 Ahg332814 Homeodomain-like/winged-helix DNA-binding family protein
38.1051 Ahg478588 LYR family of Fe/S cluster biogenesis protein
38.7943 Ahg479458 PTEN 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression