Detail



ID : Ahg494671

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494671|fgenesh2_kg.8__487__AT5G43320.1
Sequence
AAGGCCGTCT CGTCAGATTT CTTTTTCATT TTTCTTTTAA CGTTTGGTTT CGTCTGTAAT TCGTTATCTT CCTTAAGAAA AAAAAAAATC AGAATCAAAA AAAAAAAAAA ATACTGAATC AAGCTGTCTC GTAACAGTCT TTATAGATCA GACGATAATC GAATCCAAAG ACCCAATTTT TTTTGTTTCG GTCTGATTTC GTCTCTCTTT GTTCTTTTCA CCTTTTTTTT TTTTTTGTTT TGTCTCTTCC CTTTCATTTT GTGTTTCTTC AATGTTGGTC AATGGGTGAA TTTTAGTTTG AAGTTCAATT AGATTACTTG GTGAATCGAT TTGGGTCAAA ACAGTTTTGA TTCGATTCAG ATATTCGAAT TTGAATTGGG GATCTTCGAA TTAATTGAGA TCTGGGTCAA CTTTAGCTTT TAAGAGATTG AAGAAAGGAG GAAACTTTTT GATTTGGAAA CGATGGATCG TGTGGTTGGT GGCAAGTATA AGCTTGGACG TAAACTTGGA AGTGGTTCAT TTGGTGAACT TTTTCTAGGG GTTAATGTAC AAACTGGTGA AGAAGTAGCT GTGAAGCTTG AACCTGCGAG GGCTAGGCAT CCTCAACTTC ATTATGAATC AAAGCTCTAT ATGCTTCTTC AAGGAGGAAC TGGAATTCCT CATCTAAAAT GGTATGGGGT AGAGGGTGAA TTCAACTGTA TGGTGATTGA TCTTTTGGGT CCGAGCATGG AGGATTTATT TAATTATTGT AGTCGGAGGT TTAATCTAAA GACGGTTCTA ATGCTCGCAG ATCAGATGAT AAATAGAGTT GAGTATATGC ATGTCCGGGG ATTTCTTCAT CGTGACATAA AGCCAGATAA CTTTTTGATG GGTCTTGGAC GCAAAGCGAA CCAGGTGTAC ATCATTGACT ACGGACTTGC AAAAAAGTAT AGAGATCTTC AAACTCATAG GCACATTCCC TACAGGGAAA ACAAGAATCT TACTGGAACA GCCCGATATG CAAGTGTTAA CACTCATCTT GGAATTGAGC AAAGTAGGAG GGACGATCTG GAATCTCTTG GCTACGTGCT TATGTATTTT CTTCGAGGAA GTCTTCCTTG GCAAGGCCTT CGTGCGGGTA CCAAAAAACA GAAGTATGAC AAGATCAGCG AAAAGAAAAG GCTTACACCT GTAGAGGTTC TCTGTAAATC CTTTCCACCT GAGTTCACAT CATACTTCCT CTATGTACGA TCATTGCGGT TCGAAGACAA ACCAGATTAT CCATACCTAA AGAGGCTTTT CAGGGATCTC TTCATTCGAG AAGGTTATCA GTTTGACTAT GTATTTGATT GGACAATCTT GAAGTATCCA CAGTTTAGTT CCGGCTCCAG CTCTAGCTCC AAACCAAGAT CAAGCCTGAG ACCAGCTATG AATCCTCCAG TACCAACTGC GGAAAGACCA GATAAACATT CAGCTGGCGC TGGGCAAGAC AGTCGTGATA GATTCTCAGG TGCTTTAGAG GCATATGCTA GAAGAAATGG CTCAGGAAGC GGTGTGGTTC AAGCTGATCG ATCTAGACCA AGAACCTCAG AGAATGTATT AGCATCATCA AAGGATACAA CTCCACAAAA CTATGAGAGA GTCGAAAGAC CAATCTCTTC AACAAGACAC GCAAGTTCGT CAAGAAAAGC TGTTGTCTCG AGCGTACGAG CCACTTCTTC AGCTGATTTC ACAGAGAACC GCTCGAGCAG AGTTGTCCCA AACAATGGCC GTTCCTCAAC CGCTCAGAGG ACTCAGCTTA TCCCTGACCC AACCACTAGA CCATCGTCTT CTTCTTTTGC CCGAGCTGCG CCGTCGAGGA CTGCGCGTGA CATCACGCTC CAGAGCCTTG AGCTACTCAC CATAGGGAAT GGAAAGAGGA AGTGAGAAGC TTGGAGGAAA CTACGACATT TTTATGGATG GATACTTTGT TTTTATTTCA CGAAATTATC GGTTTCCTAA TTTAAGGAAT AAATCGAACT TCATTTGATT ACAATTTATA TGTGATAAGT ATATGGTTTT AACTTGTTAA GCTCTTCACT 
Length2060
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4177860.. 4181607
Download Sequence
A.thaliana
AGI-codeAT5G43320.1
Descriptioncasein kinase I-like 8
TAIR curator summary
Alias[ckl8][casein kinase I-like 8]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg482617 Family of unknown function (DUF662)
4.89898 Ahg358984 NSP (nuclear shuttle protein)-interacting GTPase
6.63325 Ahg496166 Concanavalin A-like lectin protein kinase family protein
8.3666 Ahg918231 RNA-binding KH domain-containing protein
8.66025 Ahg340908 glucan synthase-like 10
14 Ahg474191 scarecrow-like 5
17.9444 Ahg474768
18.1659 Ahg943696 NAD-dependent malic enzyme 2
18.7617 Ahg479052 Coatomer, beta' subunit
18.9737 Ahg319882 RPM1 interacting protein 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression