Detail



ID : Ahg496371

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496371|fgenesh2_kg.8__2187__AT5G61980.1
Sequence
ATGCATTTCG CTAAGCTCGA TGATTCTCCC ATGTTTCGCC AACAGATGCA ATCTATGGAA GAGAGTGCGG AGTTGCTGCG ATTGCGTTGC TTAAGGTTCT ATAAAGGATG CAGAAAATAC ACGGAGGGGC TTGGAGAAGG CTATGATGCA GATATTGGCT TTGTAAATGC ACTTGAATCT TTCGGAGGCG GCCATAATGA TCCTATTTGT GTTGCTTTTG GAGGTCCTGT AATGACAAAA TTCACTATCG CTCTACGAGA AATCGGGACA TACAAGGAAG TACTTCGTTC TCAGGTAGAA CACACGTTGA ATGACCGGTT GCTTCAATTT GTGAACGGTG ATGTCCATGA AGTTAAGGAA GCTCGTAAAC GGTTTGACAA AGCTACCATT ACATATGATC AGGCACGAGA GAAATATCTT TCATTAAGGA AGAGCACACG ACTGGATGTG GCTGCCACAA TTGAGGAGGA CCTACATAGC GCAAGAACGA CATTCGAGCA AGCACGGTTC CATCTGGTTA GTGCACTCTC TAATGCGGAG GCTAAAAAGA GATTTGAGTT TTTGGAAGCA GTCAGCGGGA CTATGGATGC TCATCTCCGT TTCTTCAAAC AGGCAAGCTT TGTCTTGAAA ACTAATTTCC GAGCAAGACC ACAAATAAAT AACTGTCCTT GGATCCAATC AGCTTGGGGA TATGAACTAC TACATCAAAT GGAGCCTTTT ATCAATCAGG TGTTGGCTTA TGCACACCAA TCTAGAGAAT GTGCAAACTA TGAGATGGCA TCACTTAATG AAAGGATGCA GGAATACCAA AGGCAAGTTG ATCGTGAAAC TAGAAACTCC AGTGGTTCTC CGACAGGGGA TGGCATGAGA CATAACTCAA GAAACTCACA GAAAGTCATC GAGGCCGTCA TGCAATCTGC TGCAAAAGGA AAGGTTCAGA CTATCAGACA AGGGTATCTG TCTAAACGTT CCTCAAACTT GAGAGGTGAC TGGAAAAGAA GATTCTTTAT CCTTGATAGC CGTGGGATGC TATACTATTA CCGCAAGCCA TGGAATTGGT CTTCAGGAAA TGGAAGTCGC TCTGTTGTTC ATAGGAATAT GACTTCAGAC AACAGTCCTG GGCTGCTAAG TCGGTGGTTG TCTTCTCATT ATCATGGTGG TGTGCACGAT GAAAAACCAG TTGCACGTCA CACCGTCAAT CTGCTGACCT CAACGATCAA AGTAGATGCA GATCAGACCG ATCTAAGATT CTGCTTTAGA ATAATTTCAC CAACGAAAGT TTATACATTG CAGGCAGAGA ACGCACAGGA TCAGATGGAC TGGATCGAAA AAATAACTGG AGTAATTGCT TCTTTGTTGA GTTTCCAAAC ACCTGAAAGA GCAATCATGC GACTGTCTAC TGTGGACGGA GGTGATACTT TCTCTGCAAG TGATTCTGGT TCTTTAGCAG ATCCTTATGA TATCGAACAG GCAGAAAGTG GAGAATCCAC AGTGGAACAT CCCATGACAG GAGGAAACCG TTCGAGGTTT TCAGGGTGCT TGCAGCAACA TGATATGGTA AAGACTGAAA AGCCAATTGA TGTCTTGACA AGAGTATTGG GTAATGAGAG ATGTGCAGAC TGTGGTGCTC CTGAACCTGA TTGGGCCTCT TTGAACCTCG GTGTCCTTAT TTGTATTGAG TGTTCTGGTA TCCATCGTAA CCTTGGTGTT CATATTTCAA AGGTCAGATC ACTCACTCTT GATGTTAAAG TATGGGAACC ATCGGTGTTG ACGTTATTCC AATCGTTAGG TAATGTATAT GTAAACTCAG TGTGGGAGGA GTTGTTGAAC TCGGAGAGTA GATCTTCCAG TGCTAGTAGG TCTTCAGGCA CTCCCAAGTC AGATCGACCA AGAAAATTGC TTGTAAGGAA GCCTGGTTTC AATGATCCCA TTTCTGTGAA AGAGTTGTTC ATTCACGCAA AGTACTCAGA GAGGATTTTT GTCCGCAAAG CAATAGACAG TCAGCATTTT CAGGCAGTTT TCCAAGAGAT ATGGGAGAAT GTCCGTGCCA ACGACAAGAA ATCAGTTTAC AGGCACATTG TCTGCTCTGA AGCAGATGTG AATGCTCTAC GTGGACAAGC ATCATACACT GTGTCTTTGC CCTTAGCAAA GATGATGCAA ATGGAAGCGA AGGAGGAAAC CCTTCAAGCG AAATTCAAGA GCATTGAAGA GGAGTTTCAA GAGAATCCAG AGGGATATTC TAGCTCAAGA GGTGAGGGGG AAAGTATGGT CAGAGAAGAA ACTTCAAACG ACTGTTCTTT GCTTCACCTT GCTTGTCTTT GTGCGGATAT CGGTATGGTG GAACTATTGC TTCAATATGG CGCAAAAATA AATGCGACAG ATTCAAAAGG TCGGACTCCA CTTCATCATT GTATCATCAG CAGGAGATAT GCAATTGCAA GGTTGCTACT TATGAGGGGA GGAGATCCAA ATGCTGTTGA TAAAGACAGT AACATACCAG TCAAATATGC TTCACAGACA GACCTCAATG ATAGCGAACT GATTGCTTTA TTAACAGACT CCAAAAGATG A 
Length2571
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19048345.. 19053260
Download Sequence
A.thaliana
AGI-codeAT5G61980.1
DescriptionARF-GAP domain 1
TAIR curator summaryA member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD1 belongs to the class 1, together with AGD2, AGD3 and AGD4. Not expressed in hypocotyls and cotyledons.
Alias[AGD1][ARF-GAP domain 1]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg488076 ankyrin repeat family protein
6.16441 Ahg919288 SIGNAL PEPTIDE PEPTIDASE-LIKE 5
6.55744 Ahg922640 KAR-UP F-box 1
24.6779 Ahg482498 poltergeist like 1
25.2982 Ahg922097 multidrug resistance-associated protein 12
33.8231 Ahg485213
34.4964 Ahg473885 Protein phosphatase 2C family protein
68.4105 Ahg480192 Xanthine/uracil permease family protein
69.4622 Ahg332797
72.1249 Ahg476432
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression