| Annotation |
|---|
| Description | jgi|Araly1|496372|fgenesh2_kg.8__2188__AT5G61990.1 |
| Sequence |
ATCGGAGATG ATGGGATCGA CGTTGTTCAG GAAGAGATGT TTGGTCAAGA GAGCGAATTG TTTACTTTTC CGGTCGTTTT CCGTTAACAA TGAGAAACTT CCCGAAGCAT CAGCTGAAAT AGCGCGAATT CTCAACCAAG GGAACTGGCG TGAGACTCTG GTATCTTCGA ATCTTTCAAT CGAGATAAAC CCAGAAGTAG TTCTCTCCGT TTTACGATCC AAACGCGTCG ATGATCCTTC TAAGCTTTTG AGTTTCTTCA ATTTGGTTGA TTCTCAAAAA GTCACGGAGC AGAAATTGGA TTCGTTTTCG TTTCTCGCTT TGGATTTGTG TAATTTCGGT AGTATTGAGA AAGCTCATAG TGTTGTAATC CGGATGATTG AGAGGAAGTG GCCTGTAGCT GAGGTTTGGA GTTCGATTGT GAGATGTTCA CGAGAGTTTG TGGGAAAGAG TGATGATAGA GTTCTTCTAT TTGGGATCTT GATTGATGGA TACACTGAAA AAGGTTTTTT AGAAGAAGCT GTATTTGTGT TTTCTAGCAC TAAGGATTTG GATTTGGATT TGGTTCCTAG TTTGGCACGA TGTAATCATT TGTTGGATGC GTTGTTGAAG AGGGATCGTC TGGATTTGTT TTGGGATGTG TATAAGGGGA TGGTTGAGAG AAATGTAGTA TCTGATGTTC AGAGTTATGA GATGCTGATT GTTGCACATT GTAGGGATGG GAATGTTCAG TTGGCAAAAG ATGTTCTTCT CAAAACCGAA GAAGAATTCG GGACGGCAAC GTTGAATGTG GATGAAGCAC TTGAGCTGAA GAAGTCGATG AGTTGCAAAG GATTGGTGGC ATCGAGGCAA TCATACAATT TACTTATAGA TGGGTTGTGT AAGCGAAAGA GACTAGAAGA TGCTAAATCG TTGCTGGTAG AGATGAATAG TGTTGGTTTG TTTCCTGATG ATTTTTCTTA TAGTTTACTG ATTGATGGTT TACTGAAGGG TAGAAATGCA GATGCTGCGA AGGGACTAGT CCATGAGATG GTTTCACATG GATTTAGCAT CGATCCTAAG ATGTATGATT ATTTTATTTG TGTGATGTCA AAGGAAGGGG CGATGGAGAA GGCAAAGGCT CTCTTTGATG GAATGATCGC ATCCGGAGTG ACACCAGGTG CTCGGGCTTA TGCTAGTTTG ATCGAAGGAT TCTTTCGAGA AAAGAATGTA CTTAAGGGTT ATGAGTTACT TGTTGAAATG AAAAAGAGGA ACATTGTCAT ATCTCCATAT ACTTATGGTA CAGCGGTGAA AGGCATGTGT TCTTCTGGGG ATCTCGATGG AGCTTATAAC ATCGTGAAGG AAATGGGTGC AAGTGGTTGC AGACCCAATG TGGTTATATA TACCACATTG ATCAAAACCT TTCTCCAGAA AAGTAGGTTT GGAGATGCAG TGAGGGTGTT AAAAGAAATG AAAGAACAAG GAATCGCACC TGACACCTTT TGCTACAATT CCCTTATAAT TGGTCTTTCA AAGGCTAAAA AAATGGATGA AGCAAGGTCG TTTCTGCTTG AAATGGTCGA GAACGGATTA AAGCCTGATG CTTTCACCTA TGGGGCTTTT ATCAGTGGAT ATATAGAGGC AGGGGAATTT GCATCTGCAG ATAAGTATGT GAAAGAGATG GTGGAATGTG GCGTAATTCC AAATAAGGTT CTTTGCACGG GTTTGATCAA TGAGTATTGC AAAAAGGGGA AAGTAATAGA GGCATGTTCA GCATTCAGAT CCATGGTTGA ACAAGGGATC CAGGGGGATG CTAAAACATA CACTGTTCTT ATGAATGGTC TTGTTAAAAA TGGTAAAGTA AATGATGCCG AAGAGATTTT CCACGAAATG CGTGGAAAGG GTATTGCACC TGATGTATTC TCTTATGGTA CTCTCATTGA TGGATTTTCT AAGTTGGGAA ATATGCAGAA GGCTTCTAGT ATTTTTGATG AGATGGTTCA AGCAGGTTTG ACTTCTAATG TTATCATATA CAACATGTTA CTTGGTGGCT TCTGCAGATC TGGTGAAATC GAAAAAGCTA AGGAACTGCT TGATGAAATG TCAGGTAAAG GTTTTCCCCC GAATGCAGTG ACCTACTGTA CAATGATAGA TGGATATTGC AAATCTGGGG ATCTGGCTGA GGCTTTTCGG TTATTTGATG AGATGAAACT AAAGGGATTA GTTCCTGATA GTTTTGTGTA CACAACACTC GTGGATGGGT GTTGCAGATT GAACGATGTC GAAAGAGCTA TAACCATCTT TGAGACAAAC GAGAAGGGTT GTGCTTCTAG TTCCGCCCCT TTCAATGCAT TGATGAATTG GGTTTTTAAG TTTGGAAAAA CAGAATTAAC AACAGACATG ATAAATCGGC TAATGGATGG GTCGTTTGAT AGGTTTGGCA AGCCCAATGA TGTAACATAC AACATTATGA TTGATTATCT ATGTAAGGAA GGAAACTTGG AAGCTGCAAA GGAGCTCTTT CACCACATGC AGAAAGCTAA TCTGATGCCT ACTGTTATAA CTTACACATC TCTTCTAAAC GGGTATGATA AAATGGGTAG AAGATCTGAA ATGTTTTCTG TATTTGATGA GGCGATTGCT GCAGGAATTG AACCAGACAA CGTAATGTAT AGTGTTATCA TCAATGCTTT CCTGAAAGAA GGGATGACGA CAAAAGCACT TGTGCTTGTG GATCAAATGT TTGCTAAGAA CGCTGTTGAT GATGGGTGTA AGCTAAGTAT TTCAACATGC CGGGCTCTAC TCTCTGGTTT TGCCAAAGTG GGAGAAATGG AGGTAGCTGA GAAGGTTGTG GAGAACATGG TTCGACTCAA GTATATTCCT GATTCTTCGA CTGTTATTGA GTTAATCAAT GAAAGTTGCA TTTCCTCAAA CCAGAGAATG GCAGCTGATG CAGCTCCTTA GATTTTTAGA CGGAAAGCCT TCTTTTTCGT TGTGGCTAAA AAGTTTGGTT TACTGCCAAT TTCTTGGCCA ACATGAAAAT TGCTGAAGGT TTGCAATTGT GTCAAAAGTT ACAAGCTTTA TCCTCTCACG TTTGATGATC TCTACGCAGT CGCAATCTTC TGATATGTCA TTGTATATTT TTTCAGTTAC CATTAAGAAT TTGGAGTTGC TGTTCCTGAA ACAACTTGTG TCTGCTCATA AACTCTTCTG GACCAATTCA TTTGCTCCAG AACGGATTTG CCTTCAGCTA GACATGTTGG ATCTCATTGA TTTTACATGG CAGTAGTTTC CATTATGATG ACGACAATCA GAAGTTGACG ATGAAAGGGA GACGCATGAA TGTTACTATG ATGATCAAAT TATATAAAGT TCTTTATTCA TCAGTCAGTA TCAAAAGCTG GCTGGTGATT TAAAGC |
| Length | 3396 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 19053695.. 19057361 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G61990.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.1311 |
Ahg471937 | Phosphoinositide phosphatase family protein |
| 19.2094 |
Ahg476275 | tubulin folding cofactor E / Pfifferling (PFI) |
| 27.6767 |
Ahg479191 | ubiquitin protein ligase 6 |
| 29.2404 |
Ahg485160 | SUGAR-INSENSITIVE 3 |
| 34.6987 |
Ahg480570 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| 38.8844 |
Ahg484968 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 41.3521 |
Ahg489171 | Tudor/PWWP/MBT domain-containing protein |
| 42.3084 |
Ahg888834 | helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding |
| 43.6234 |
Ahg476410 | Homeodomain-like/winged-helix DNA-binding family protein |
| 46.2601 |
Ahg935637 | transducin family protein / WD-40 repeat family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|