Detail


ID : Ahg888834

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888834|Al_scaffold_0007_820
Sequence
ATGGACTCAG ATTCCTCGAA ATCGCGGATT GATCAGTTTT ATGTATCAAA GAAGAGGAAA CACCAGTCAC CAAATTTGAA ATCTGGGAGA AATGAGAAAA ATGTGAAGGT GACAGGAGAA AGATCTCCTG GAGACAAAGG CACTTTGGAC AATTACTTGA AAGCCTCTCT GGATGACAAG AGCACTACCA ATAGTGGGTT GCAGGCAAGG CAGGAGGCGT TTACAAGAAA ATTGGATTTG GAGGTTTCTG CTTCGTCTGT TGGTGAAAAT ATAAACCCCT GCCTGCCTAA ACCTGTAACT ATTGCAACTT TTAAAGAGTG TTTGGACCAG AACGGATCTC GAGATTTGCA TAAAGAAGGT GTTGCAGCTG AAGCTCATGC AACAGATGGT TTGCACTGTG CTAACCAGAA AGATAATTCA GAACTAAGAG ACTTTGCCAC TAGTTTCTTG TCCTTGTATT GTAGTGGTTT GCAGTCTGTT GTTGGCTCAC CTCCACATCA GAAGGCAAAT GAACTGAAGC GTCGAAGCAG TTCATCATCA CTTGCCCAAG ATATACAAAG TTCTCACAAG AGGCGTTGTG AGTCCGAAAA TATACCATCA CTAGATGATC TTGCAAATCC TCTCGGGAGT AAGCCTGAAT CACTCGCTAG GAATGGTGAT AATAGAGATA AATCTGTTTC AGACCATACA AAGAAGATGC CGAGCAATGA ATATGTTGAA ATTCCAATGG GCTTGAGGAA GTGTAGTAAG GCGCCAGAAT CATCTGCTCA TCTAACTGAA TTCCACACGC CTGGATCAGC CATTAAATCA TGTCCTGTTG GAACCCCTAA GTCAGGAAGT GGTAGCTCAA TGTTCTCACC TGGTGATTCT TTCTGGAATG AAGCAATTCA AGTTGCTGAT GGTTTGACAA TTCCAATTGA GAACTCTGGT TCCGTAAAAG TTAAAGATGG AGATCAACAT GGAACTATTC TTTCATGCAG CAACAAAACA GATAAATGCA ATGAAATGTT AAAGAGGAGT TTAGATTTAG ATGAAAGCAG AGTAAACGAT AAAGATGCCA TTGGTTTTTC AAAGGTCTTG GAGAAGCATG GGAGAGACTT TAATAAAGAA GTATCTCCGC TTCCTGTCAA GAATCTTGAA CTTTTGTTTC AAGATAAGAA CATTAATGGA GGTCTTCGAG AGCAATGTGC TTCATTTGAT CAAAATAACA TTACTCTAGG AAGCAGTAGG ATCTCTGAAT CTGCTTTCGT CGATAATAAA GGATGTGAAA CTCTTGATAT TGTAAATTCT CAGGCAGATA AAGGTTTGAT AGGCAAGATG TATCCAGAAC CCGAAGGAAA GAAAGTTTTA CTGTGCGAGG AAAATCGTGG TGTAAGATCT GTTTCTATGG TAAGCAACAT GAGGAAACCA GTTGATTCTA GTGAATCTGA AGAAAGTCAT ACTCCTTCAA GCTCTCACCG TAATTACGAT GGTTTGATTC TCAGCACTTG GCTTCCCTCA GAAGTTTGTA GTGTATACAA TAAGAAAGGA ATATCCAAAC TCTATCCTTG GCAGGTCGAG TGTCTTCAGG TAGATGGTGT TTTGCAGAAA AGGAATCTAG TATATTGTGC TTCTACTAGT GCTGGTAAAA GTTTTGTTGC AGAAGTCTTG ATGCTGCGCC GGGTCATAAC AACTGGAAAA ATGGCATTGC TTGTGCTACC TTATGTATCC ATTTGTGCCG AGAAGGCGGA ACACCTTGAG GTCCTTCTTG AACCACTTGG TAAGCATGTT CGTAGTTACT ATGGAAATCA GGGTGGTGGA ACACTTCCTA AAGGCACTTC TGTGGCTGTC TGCACGATTG AGAAGGCAAA CTCTTTGATA AATCGCTTGC TCGAAGAGGG TCGTTTGTCA GAACTTGGGA TAATAGTTAT AGATGAGCTA CATATGGTGG GTGACCAGCA TAGGGGTTAT CTTTTGGAAC TTATGTTGAC GAAACTTCGT TATGCTGCTG GTGAAGGCAG TTCAGAATCA AGTAGTGGTG AGAGTTCAGG GAATAGCAGT GGCAAGGCTG ATCCTGCTCA TGGCCTACAA ATTGTGGGTA TGAGTGCTAC AATGCCGAAT GTTGGCGCAG TTGCTGACTG GCTTCAAGCA GCTTTATATC AAACAGAGTT TCGACCAGTT CCACTAGAGG AGTATATTAA AGTTGGTAGC ACCATTTACA ATAAAAAGAT GGAAGTTGTG AGGACTATAC CAAAAGCTGC TGATATGGGA GGGAAAGACC CAGACCATAT AGTTGAGCTT TGTAACGAGG TTGTTCAAGA GGGCAATTCA GTGCTGATAT TTTGCTCGAG TCGAAAAGGA TGTGAATCAA CTGCTAGGCA TATTTCAAAG CTCATTAAAA AAGTTCCCGT AGACATTGAT GGTGAAAATA GTGAGTTTAT GGATATCAGA TCTGCTATTG ATGCCCTGCG AAGGTCTCCG TCTGGAGTAG ATCCTGTACT AGAAGAAACT CTTCCCTCTG GAGTTGCCTA TCACCATGCT GGTCTTACAG TAGAAGAAAG AGAGATAGTT GAGACCTGTT ACCGTAAGGG TCTCGTACGT GTCTTAACAG CTACATCCAC TTTGGCGGCT GGGGTTAACC TGCCTGCAAG GAGGGTTATT TTTCGACAAC CAATGATTGG CCGTGATTTT ATTGATGGAA CAAGGTACAA GCAAATGTCT GGTCGAGCTG GGCGGACTGG GATTGATACA AAAGGAGAAA GTGTTTTGAT TTGCAAACCT GGAGAACTCA AGCGAATAAT GGCACTTCTT AATGAAACCT GCCCACCATT GCAGTCTTGT TTATCTGAGG ATAAAAATGG AATGACTCAT GCGATACTAG AAGTTGTGGC AGGTGGAATT GTTCAGACTG CCAAAGATAT TCATCGCTAT GTTAGGTGTA CACTTCTGAA TTCTACAAAA CCCTTTCAAG ATGTGGTCAA ATCAGCTCAG GATTCTCTGC GGTGGCTGTG CCACAGGAAA TTTCTTGAGT GGAATGAAGA GACAAAGTTA TACACTACAA CACCCCTTGG ACGTGGATCT TTTGGAAGTT CACTCTGCCC AGAGGAGTCA CTTATAGTGC TGGATGATCT TCTACGAGCA CGTGAAGGAC TAGTAATGGC TTCTGATTTG CATTTGGTCT ACTTAGTCAC ACCAATCAAT GTTGGTGTTG AACCAAACTG GGAATTGTAT TATGAACGGT TCATGGAACT GTCTCCTTTA GAGCAGTCTG TTGGCAATAG AGTTGGAGTG GTCGAACCTT TCCTGATGCG CATGGCACAT GGTGCAACAG TTCGCACTAT AAACAAACCA CAGGATGTAA AAAAAAATTT GCGTGGAGAA TATGACAATC GGCATGGTTC AACAAGCATG AAGATGCTTT CAGATGAACA AATGCTTCGA GTGTGCAAAC GATTTTTTGT TGCTCTAATC TTGTCAAAAT TAGTTCAGGA AGCTTCTGTG ACTGAGGTCT GTGAAGCCTT TAAAGTGGCT AGAGGTATGG TTCAAGCGCT ACAGGAGAAC GCTGGAAGGT TTTCTTCTAT GGTTTCAGTG TTCTGTGAGA GGCTTGGATG GCATGATTTG GAAGGCTTAG TTGCCAAGTT CCAGAACCGT GTTTCATTTG GTGTCAGGGC TGAGATTGTT GAACTTACTA GCATTCCATA TATAAAGGGT TCAAGGGCTA GAGCGCTGTA TAAAGCTGGC TTGCGTACAT CTCAGGCGAT AGCTGAAGCG TCCATCCCTG AAATTGTCAA AGCTCTCTTT GAATCTTCAG CATGGGCTGC AGAAGGTACT GGACAAAGAA GGATACACTT GGGATTAGCC AAGAAAATCA AGAATGGGGC TCGCAAAATT GTTCTTGAGA AAGCAGAAGA GGCGAGGGCT GCTGCATTTT CTGCTTTTAA GTCACTTGGT TTGGATGTTC ATGAGCTTTC AAAGCCCTTG CCTTTGGCTC CTGCTAGTAG TCCCAATGGA CAAGAAACTA CTGAAAGAGA GATTTCCAGA ATCTCTGTTG GTCCCGATGG ATTACAACAA AGCATAAAGG TGCACATGGA ATGTGAAAAC TTTGATATGG ATAATCACAG AGAAAAGCCA AGTGAAGTAT TAGGTGCTAC CTTAGGGGTT TCATCAGAAG TTAACATGAC CAGTCGTCTT CCTAATTTTG GACCTATAGG AACTACAGTC GGCACTAATG GGCCTAGTGT TGTTAGTATT CTTTCCAGTG ATACTTTGCC TATCCCTGTT TACGATAACA GAGAGATAAA AACTGAGGAC AATGTTGAGC AGCATTTGAC TAGGAATGCC AATAAGGATG GTACAGGTGA AAAGGGTCCA ATAACTGCAG GAAATATTAG TGGTGGATTT GATTCTTTTC TGGAACTTTG GGAATCTGCT GGGGAATTTT TCTTTGATCT TCACTATAAT AAACTACAAG ATTTGAATTC CCGCATCTCT TATGAGATAC ATGGAATTGC TATATGCTGG AATAGCTCCC CTGTATACTA TGTCAATCTT AATAAGGATC TTCCCAACCT GGAATGTGTA GAAAAACAAA AGCTCATCGA AGATGCAGTT GTTGGCAAGA ATGAGGTTTT GGCTACCCAC AACATGTTTG ATGTTATAAA ATCTAGGTGG AACAAAATCA GTAAAATAAT GGGGAATGTA AATACGAGAA AGTTCACGTG GAATTTGAAA GTCCAGATTC AGGTGCTTAA GAGTCCCGCC ATTTCAATCC AAAGATGCAA TCGCTTGAAT CTTGCAGAAG GGATCAGGGA TCTTGAGTTG GTTGATGGAT CTTGGTTAAT GATGCCTCCT CTTCACACAA GCCACACCAT TGACATGAGC ATTGTGACAT GGATTCTTTG GCCAGATGAG GAAAGACATT CAAATCCAAA CATCGATAAG GAAGTAAAGA AAAGGCTATC CCCAGAGGCA GCTGAAGCTG CTAATCGCAG TGGCAGGTGG AGGAATCAGA TCCGAAGGGT TGCCCACAAT GGTTGCTGCA GACGGGTTGC TCAAACGAGA GCCCTTTGTT CAGCTCTTTG GAAGATCCTT GTTTCCGAAG AACTTCTTGA AGCACTGACA ACCACTGAAA TGCCGCTGGT TAATGTCCTT GCAGACATGG AGCTCTGGGG TATAGGTGTC GATATAGAAG GATGCCTTAG GGCACGGAAT ATACTGCGGG ATAAACTGCG GTCCCTTGAG AAGAAAGCAT TTGAATTGGC TGGCATGACA TTTTCATTGC ACAACCCAGC TGATATTGCA AATGTGTTGT TTGGACAGTT GAAGTTGCCC ATACCTGAAA ACCAATCCAA AGGGAAACTT CATCCAAGTA CAGATAAGCA TTGCTTGGAT CTTTTAAGGA ATGAGCATCC TGTTGTCCCA ATCATCAAAG AACACCGCAC TTTGGCAAAG CTCTTAAATT GTACACTTGG ATCAATTTGT TCGCTTGCTA AACTACGCTT GAGCACGCAA AGGTACACTT TGCATGGCCG CTGGCTTCAA ACATCAACAG CAACTGGGCG GCTTTCCATA GAGGAGCCTA ATCTCCAATC TGTTGAGCAT GAAGTAGAGT TCATATTGGA TAAAAATGGA AAGGACGTAA ATTCAGATGC TGATAGTTAC AAAATAAATG CACGTGATTT CTTTGTTCCT ACTCAGGAAA ATTGGTTACT CTTGACGGCA GATTATTCAC AGATAGAGTT GCGACTTATG GCACACTTTT CTAGAGATTC CTCGTTGATT TCACAGCTTA GACAGCCAGA GGGTGATGTC TTTACGATGA TAGCTGCAAA ATGGACTGGA AAAGCCGAGG ATTCTGTTAG TCCACATGAT AGAGATCAGA CCAAAAGATT GATCTACGGA ATTCTTTATG GAATGGGTGC AAACAGGCTC GCAGAACAGC TTGAGTGCAG CTCAGATGAA GCCAAGGAGA AAATTAGAAG CTTTAAAAGT TCTTTCCCTG CAGTCACCTC TTGGCTAAAC GAAACGATTT CATTTTGCCA GGAAAAAGGA TACATTCAGA CTCTCAAGGG AAGAAGGCGG TTCTTGTCGA AAATAAAATT TGGGAATGCC AAAGAGAAAT CTAAGGCTCA AAGGCAAGCT GTAAATTCCA TGTGCCAGGG ATCTGCTGCT GATATTATCA AGATTGCGAT GATAAACATA TATTCTGCAG TTGCTGAAGA TGTTGATACC ACAGCATCTA GTTCTTCAAG TGAAACTGGG TTTCACATGT TAAAGGGACG ATGCCGAATT CTTCTACAAG TACATGATGA ACTTGTGCTA GAAGTTGATC CTTCTTACGT AAAAGTAGCT GCAATGTTGC TACAAACCAG CATGGAAAAT GCGGTGTCAC TTCTCGTCCC TTTACATGTG AAACTGAAAG TTGGAAAAAC ATGGGGTTCT TTAGAGCCGT TTCAGGCTGA TTAA
Length6444
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3449974.. 3461402
Download Sequence
A.thaliana
AGI-codeAT4G32700.2
Descriptionhelicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding
TAIR curator summaryEncodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg494795 SET domain protein 25
8 Ahg336756
11.6189 Ahg322516 cleavage and polyadenylation specificity factor 73 kDa subunit-II
12.2474 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
16.3707 Ahg337406 Protein kinase superfamily protein
17.7764 Ahg936852
19.3907 Ahg944576 sister-chromatid cohesion protein 3
23.0217 Ahg480836 H(+)-ATPase 1
28.5657 Ahg937500 Leucine-rich repeat protein kinase family protein
29.3258 Ahg482661 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression