Detail



ID : Ahg496448

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496448|fgenesh2_kg.8__2264__AT5G62650.1
Sequence
CCGAACCGAA CAGTCAGGTT AATGGGTTCG CCGGATAAGC AACATCGCCG CCACGTCGCC GCCGAATTTC TCCACAGCGC CGTAACCTCA ATCATTCCTC TCATCCCCCC CAAAACGGCG CCGTCTCGTG TATGCCTCCC ACTTAGATTC TCGGTATCAG ACGATGTCTC GTCCCCATTC GAATCGACGG TGAAGAGCTC ATCATCCACG TCGTCTTCCG GCCTTAATTC AACGGTTAGG ATTTCATCTC TCAGCTCCGA TGGGAAACGC GGTGGACCTG CCTTCGTCGG CCAGGTCTTT AGTATGTGTG ACCTTACTGG GACTGGTCTA ATGGCTGTTT CTACTCACTT CGATATTCCT TTCATCTCCA AGAGGACACC TGAGTGGCTA AAGAAAATGT TTTCGACTAT CACTAAGAGC GAGAGGAATG GCCCTGTGTT CCGTTTTTTC ATGGATCTTG GTGATGCAGT TTCATATGTT AAAAAACTAA ATATTCCAAG CGGAGTGGTT GGGGCTTGTC GACTTGATTT GGCATATGAG CATTTCAAGG AGAAACCTCA CTTATTTCAG TTTGTTCCAA ATGAGAGACA GGTGAAGGCT GCCAACAAAC TTCTCAAGTC AATGCCACAA GATGGTAGAA AACAAAAGGT AGAGGGCGTC CCTGTTTTCG GTGCTCAAAA CTTGGACATC GCTGTTGCAA CTGCAGATGG AATTAAGTGG TATACCCCAT ACTTCTTTGA TAAAGCTGTA CTAGATAACA TTCTTGAAGA GTCCGTAGAT CAACATTTCC ATACTTTAAT CCAAACCCGG CATGTGCAAC GACGACGGGA TGTTGTTGAC GATAGTTTAG CTTCAGAGGT TATGGAAGAG ATGGGAGATA GCATGCTAGA GCCGCCAGAG GTTCAAGAAG CCATGGAGGA GATTGGCAGT TCCGGAATTC CTTTGAGTGT TGTGGCAAAG GCTGCAGAGA TTCAGCTCCT ATATGCCGTT GACAGAGTAC TTTTAGGCAG TAGATGGTTT CGAAAAGCCA CGGGTATTCA GCCAAAGTTA CCTTATTTGG TTGATTCTTT TGAAAGAAGG AGTGCATTTT CTATCCAAAG AGCGTCAGGG TCAGCAACTA GATGTCTTGG TGATTCAGTA GAAGCAGATA CTTCCGCATC ACTGCTTAGA GTAGAAGATA ATAGTCCAAG CGAAGACGAA AAGAGACAGC AAAATCTCTG GTTTCCTTTT GGAGATTGGA TTAATCACTC TGAATCGAAA AAAGAACACA CTCATCATAA GGGTCCATCA GATGGAAGGG ATATGGAATC TAGAGAGAGA GAAATGCTGC GAAGTCCTTT CTTACCAAAG ATAACAATGG TAGGGATTTC AACAGGAGAA GCTGCACAAA TGAGTAAGGC TAATCTCAAG AAAACAATGG AAGATTTAAC AGAAGACTTG GAGCAATCTG ATGAAGGGAA TGATCATGGT TCGAAACGTT ATGACCCTCG AAAGATGGAA GAGAGAGATC CTCTTTTTGT TGCAAACGTC GGAGATTACT ATTCGGGTAT GGCGAAAGCT GGTTCTGCTC GGTTGTCACG TCGAGGGGAT GACCAGTAAC GAAACACATC CTATTGTGTG AATTGCTCAA GCCTAGTTAC TTTTGTTGTC ATGTTAAAAA TATACAATTT TTACCCGATG TATTTTTATT ACTCGGTGTA TAATTTTGAA CGTGAAAATG CACTTTTTTT GTTTATAACA TTATTCTCAT TGGTTACGAA ATTAATATG 
Length1769
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19374247.. 19377656
Download Sequence
A.thaliana
AGI-codeAT5G62650.1
DescriptionTic22-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Ahg489009 methionine synthase 3
6.48074 Ahg473716 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
8.06226 Ahg920318 ARM repeat superfamily protein
11.3137 Ahg910878
11.3137 Ahg919825 protein phosphatase 2A-2
13.0384 Ahg895977 RNA polymerase II transcription mediators
13.7477 Ahg903661 arogenate dehydratase 2
14.0712 Ahg486635 Pentatricopeptide repeat (PPR) superfamily protein
14.7648 Ahg324617 embryo defective 1703
15.4919 Ahg484260 SPFH/Band 7/PHB domain-containing membrane-associated protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression