Detail



ID : Ahg496562

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496562|fgenesh2_kg.8__2378__AT5G63760.2
Sequence
TTTACCTTCG GAGTCAATCT TGATTCCGAT GGGACTCGAA TCGGGTTTTG GAGCGTTTGG GTGAAGACGC GGAGAAACTA ATGACTGAAT CAGGTTTGAA ATCAGTTGTA ATTGATTCGA ATCAAGATTT ATCTGATGTA TCTTGTGGGA TTTGCTCTAA GATTGGTGAT GGTGATGGTT TAATCTCCAC GGCTTGTTGT TCTCACAAGT TGTGCAACAC TTGTTGGAGC GAGTATCTTG AGAAGAATTT CTTCTCTGTG GAGAAAAACC AAACTGCAAT CTCTTGTCCT GATCAATCTT GTCGAGCTGC TGTTGGACCG GACACGATTG AGAAACTCAC CGTACGTGAT CAAGAGATGT ACGAGAAGTA TGTTCTGAAA TCTTACCGTG AGAGATGTCT GGGATGGAAG ATCAAACAGT GTCCTGCTCC GGGTTGCAAT TACAACATTG AGTTTCATCT GGCGAGTGAA GATGAAGAGC ATAGCTTAAA CATTGTGTGT CTCTGTGGTC ATATCTTCTG TTGGAGATGC ATGCTTGAGT CACACAGACC AGTGACCTGC AACAACGCTT CTGATTGGTT GTCTAGAGAC CTGAAGAAAT TGATAGGAGA AGTAGACAAG CCATCGACCC TCTCCTGGAT TGAAACCAAT ACCAAGCCTT GCCCTCATTG CTTTATTCCT GTGGAGCTTG ATGATGTACA CCAATGGAAC CAGTTCTTGA CTTGTGCCTG CAGTGGGCGT TTCTGTTGGA AGTGTTTTCA GTCACCGGAA GCTCACGGAA TCTATGGATC CTGTTTTGCA CCGGAGGATT TGAGCAATAT TTCGTGTTTG GATCTCTGGA AGGCAAGTCA GGTTTCACTG GAGCAAGCTA AATCCGAGCT AGAAGCTTTC GAGGAATCCA TAATCAAGAA ACCTAGTGAC TTGAAGGAGC AAGACGTTAA AGTACTAAGA GAAGGACTGA TGCTCGTTGT TCAGTGCAGA CAGTTCCTCA AATGGAGCTG TGTGTACGAC TATCTCCACA CAGAGTATGA TATGGCGAAG AGAGAGTACC TGCGATTCCT CCAAGAAAAC GCGTCTGCCC TTGTCCACAG TTTCTCACAG GGTATAAAGG AGGAAACAGA AGCCAAAGAG CTTACTCGCG GTAAGCTATT GAGTGAGACA ACCAACATTG GGAACTACTT TTATCATTTC ATCAAGACTT TACGAGAAGG TTTAGCCGAG GTGAAGGCGA AGTCGTACGA CAACTATGGT GGTCCTTATT GGTTGTGCGA TCGCTGCACA TATGGAAACT CTTGGTTCGA GAGGGCCTGT AAGATGTGCT GTGATCCTAC TGCATCCAAT ACGGACGAGC TAAGTGATTG ATCTCTTAGC TAAAAGGTTT TAGGAGACAG GAACCTTGCA ATTTAAGTTC TTAAGATTCT GTTTTTTCTT TTCTTTCTTT CTGCAGTTTT AGGGGGTTTG TACTGGACTA CCAAATTTTA ATGTCGAATT GAATTTTTTT TCTTTCTTGA TAGTTCAGAG TTACAATGCT TTGTGA 
Length1536
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19861287.. 19863261
Download Sequence
A.thaliana
AGI-codeAT5G63760.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[ARI15][ATARI15][ARIADNE 15][ARABIDOPSIS ARIADNE 15]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg484673 NAC domain containing protein 3
11.8743 Ahg347510 NAC domain containing protein 60
14.5602 Ahg924948 SNARE-like superfamily protein
16.7332 Ahg936232 Protein of unknown function (DUF626)
26.6646 Ahg482040 Plant protein of unknown function (DUF828)
27.7128 Ahg934962 Galactose oxidase/kelch repeat superfamily protein
30.7571 Ahg941035 Ankyrin repeat family protein
31.305 Ahg475889 sulfur E2
31.305 Ahg934714
32.0312 Ahg924719 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression