Detail



ID : Ahg496651

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496651|fgenesh2_kg.8__2467__AT5G64430.1
Sequence
ATTTCTTTCT AAATTCTTCT CTTCATGAAT TAATCCCCCA ACAAAAAAAA AAAAAATCAT TTAATTTTCG GCGAGAGATG GAGAAATTCT CGTACAACTC TTATCCAGAT TCAACCGACT CGTCACCGAG ATCTCGTGAG ATCGAATTCG ATAACCCGCC TCCATGGGAT GATCAGAACC AGAACCAGCA GCAACAGAGC TACAAGGTGA GGTTTATGTG TAGCTATGGC GGCAAGATTC AGCCACGGCC TCATGATAAT CAGCTTACTT ATGTTAACGG AGAAACCAAG ATCCTCTCCG TTGATCGCGG GATTAGATTC CCTGTTTTAG CTTCCAAACT CTCAGCCGTA TGCGGCGGCG GTGATGGCGG CGGAGGAGAG GTTACGTTTA AGTATCAGCT TCCAGGAGAA GACTTAGACG CCTTGATCTC GGTTACGAAC GATGATGATC TGGAGCATAT GATGCACGAG TACGATCGGT TGCTTCGTTT GTCGTCTAAG CCAGCGAGGA TGCGTTTGTT TCTTTTCCCG GCTTCTTCTG CTTCCGGTGG ATTTGGTTCT CAAAGTTCGA CTCAATCGGA TCGAGATCGC TTCGTCGAGG CGTTAAACAC TGTTCCGAGG CTATCTGAAT CGGAGAAATC CGTAACTGCT CCTCCCAATA ATGCGGATTT TTTGTTTGGA TCCGAGAAAG TTGCAGCTCC GCCGCCGCCA CCACCGGCTG AGGTGAAATT ACCAGTACCG GCGGTGATAG AACCGCCTTT GTTCAACGAT CCGCGTGTGA TTCAACCGGA TCACGTCGTC AATCCGATGG AAATTCAAAG ACAAATGCAG GAATTTCAGA GGATGCATAT TAGGGATCAA GAACAACAGC AACAACAACA GGAAGCTGTA TACAGGAGGA AGAGTAACGA AGACGGTTTA ATGGACACCG GAGGTGGATA CTTTTCTCCG CCGTACATAC AAAATCCGGC GCCGCAACCG ACGATTCCTC AAACGAATCC ACAAGCTCCA CCTCCTCCGA TGACGACCTT CTGGCAAGGA AACCACAATC CAGGAGGCGT ATTTCCAACA ACCACACCAG GATTAGGATT ACCAGAGCAA CCGGTATACA TGATTCCATC CCCATCTCCG GTCTACCACG CGCCACCACC GCCTCAACCG CAAGGTGTCA TAAGACCAAT AGCTACAGGA CAAGTAAACC ATGGTGGCTA CTATCCTCCG GTACAGCGAA TGGCTTCAGA TACTTACAGG GAACCACCGT ACCACGTGGC TCAGCCACCA ATAGGAACAA AAGCTCAACA ACAACAACAA CCTCCTCCTC AGCCTTTTAC CTCTGGTCCT CCTCCACCGC AATACACGGC CGTTCCACCG CCACGACAAG TAGTAGGATT ACCAGATACA TCAGCGTATA CTCAGGTGAC TTACACCGGA GGAATGGGGA AACAAGTTTA TTACACAGAG GCTCCACCGC CGCAGTACCA TGGAGTTGGA TTACCTGTAA CTGGTATGAG TGAATTGAGA ACTGGACCGG ACGGGAAGCT TGTTGCCATG AACATGGCAC CTAAAGTTTC ATCTCAGAGT TCAGATTCGG CTGTTTGATT AATGAGGTAT TTCATATGGT TGAATCAGAT TATTGTTAAT CCATCCATTA CAAGATATTT CATCATCTTT TATATATATA GTGTAATTGA GATCACTTTG GTGTCTGATA AATAATGTCT TTTTTTCTGT ATCTACTTGT TTATTTTATC TTATGATGAT GTTCTTGATT CTGCAACTTC CATCACTTTG CTTAAATTCA GTCTCGTGTT CATTTACTTG CTTTTTTATC TGAGAACCTT TGAAGCCTTT TTACCTTT 
Length1858
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20173314.. 20175180
Download Sequence
A.thaliana
AGI-codeAT5G64430.1
DescriptionOcticosapeptide/Phox/Bem1p family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg492373 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
9.48683 Ahg488679
13.8564 Ahg927471 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
14.2829 Ahg935374 RING/U-box superfamily protein
15.4272 Ahg340965 Protein of unknown function (DUF1423)
16.0935 Ahg951646 RNA-binding (RRM/RBD/RNP motifs) family protein
16.5831 Ahg490270 polyubiquitin 10
16.7332 Ahg489979 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
19.6723 Ahg484003 reduced epidermal fluorescence 4
20.7846 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression