| Annotation |
|---|
| Description | jgi|Araly1|484003|fgenesh2_kg.4__3063__AT2G48110.1 |
| Sequence |
ATGGCCGTGG CTCCGTCGGA TTTCCAACCG ACTCTCTGGG ACTCGGTTAC GTCGCTGATT AGGTCAACCC AGGAGAAGAA CGTCGATCCG CTTCAGTGGG CTCTTCAGCT TCGCCTGACC CTCGCGTCTG CTGGAATCTC CCTTCCCTCT CCGGACCTCG CTCAATTCCT CGTCACCCAC ATCTTCTGGG AAAATCACTC TCCTCTTTCA TGGAAGCTTC TCGAAAAAGC TATATCCGTC AATATCGTCC CTCCCCTACT TGTCCTCGCC CTTCTCTCCC CAAGGGTAAT CCCAAACAGA AAGCTTCACC CCGCTGCCTA TAGGCTCTAT ATGGAACTCC TCAAGAGACA TGCATTCTCA TTCATGCCTC AAATCAGAGC ACCAGGATAT CACAAAACAA TTAATTCCAT CGATGATATC CTCCATCTTT CTGAAACCTT TGGTGTCCAA GATCAAGAAC CGGGAAGTAT TCTCCTTGCA TTTGTCTTCT CCATTGTCTG GCAGCTAGTT GATGCATCCC TAGACGAGGA AGGGCTTTTA GAACTCACAT CTAATAAGAG GTCTAAATGG CCAAGCAGGC CACATGACAT GGAAATAGAC GGGCTGGAAA ATTCTGTCAA GAGAAATGAA AACCACGATG CACTTGAGAA AGCAAACACT GAAATCGCTA TCGAGCTAAT CCAAGACTTT TTGCAGAATA AAGTCACATC GAGGATTCTT CACTTGGCAA GTCAAAACAT GGAGAGCAAG ACCATCCCTC GAGGAGAATT TCATGCGATT GTCTCCTCTG GTTCTAAGCT AGCATTGACT AGTGACTCTG CACTTTGGTT GCCCATTGAT CTTTTCTTCG AAGACATAAT GGATGGGACA CAAGCTGCAG CAGCCAGCGC TGTTGAAAAT CTAACTGGTC TTGTTAAAGC ATTGCAGGCA GCTAACAGTA CAACATGGCA TGATGCCTTT CTAGCTCTAT GGTTAGCAGC CTTACGCCTT GTGCAAAGGG AGAATCTATG TCTGCGTTAT TGCTTTATCA TTCATATGAT GGAAATATTA TCTGAAGAAA GAGATCCAAT CGAGGGTCCT GTGCCCCGCA CCGACACTTT TCTTTGTGTA TTACTATCTG TCACTCCACT TGCAGTTGCC AATATTATTG AAGAAGAAGA AAGTCAGTGG ATTGATCAAA CTTCATCTAG CCCAAGCAAC CAGTGGAAAG AGAAAAAAGG AAAATGTCGA CAAGGATTAG TCAATAGCTT ACAACAACTT GGTGATTATG AAAGCTTGCT GACACCACTT CGTTCTGTAC AGTCCGTTGC CAATCAAGCT GCTGCTAAAG CAGTTCTTTT CATCTCCGGC ATTACAAATG GTAATGGTTC CTATGAAAAT ACAAGCATGA GCGAATCTCC AAGTGGCTGC TCTGGTAACA TGCGCCATCT GATAGTGGAA GCTTGTATCT CCAGAAATCT GTTGGACACA TCTGCATATC TCTGGCCAGG CTTTATAATT GGGGGAACCA ATCAAGTTCC TCAAGGTATC GCTGGTAATA TTTCTTGTTG GTCTCTAGCG ATGAAGGGTT CTCCTCTAAC ACCGTCATTG ACAAATTCAC TAATCACAAC TCCAGCTTCT AGCTTAGCAG AGATTGAAAA GATGTACGAG GTTGCAACTA CTGGTTCAGA AGATGAGAAG ATAGCCGCAG CTTCTATTCT CTGTGGAGCA TCTCTATTTC GTGGTTGGAG CATACAGGAG CATGTTATTA TCTTCATTGT AACTTTACTC TCACCTCCGG CTCCAGCTGA TCTTTCTGGG AGTTATAGCC ATCTAATCAG TTCTGCGCCG TTTCTTAATG TTCTTCTTGT CGGGATATCA CCCATAGATT GTGTTCAGAT TTTCTCATTG CATGGGGTGG TCCCATTACT TGCTGGTGCT TTGATGCCAA TATGTGAAGC GTTTGGCTCC GGCATTCCGA ACATTACGTG GACTCTCCCG ACTGGCGAAG TAATCTCCTC TCATGCTGTT TTCTCCACTG CATTTACACT TCTTCTAAGG CTATGGAGAT TTGATCACCC ACCACTAGAT TACGTCTTGG GAGACGTTCC GCCGGTGGGC CCTCAACCAA GCCCCGAGTA TCTTTTGTTA GTAAGAAATT GCCGTCTGGA ATGTTTTGGA AAGTCCCCAA AGGATCGCAT GGCACGTCGA AGATTTTCGA AAGTGATAAA TATCTCTGTG GATCCTATCT TCATGGATTC ATTCCCCAGA CTGAAACAGT GGTACCGGCA GCATCAGGAA TGTATGGCTT CAATTCTCTC TGAACTAAAG ACAGGAAGCC CAGTACATCA CATTGTTGAT TCCCTCCTTA GCATGATGTT CAAGAAGGCA AATAAAGGTG GTAGTCAGTC ACTGACTCCA TCTTCAGGGA GCAGTAGTTT ATCTACTTCT GGGGTGGACG ACTCGTCTGA TCAACTCAAG TTACCTGCAT GGGATATCTT GGAAGCGGCC CCGTTTGTGC TTGATGCTGC CCTTACTGCA TGTGCTCATG GATCACTCTC TCCCCGGGAA CTAGCAACAG GTCTTAAAAT CTTGGCTGAT TTTCTGCCGG CAACACTAGG AACCATGGTT AGCTACTTTT CTTCGGAAGT AACACGAGGT CTGTGGAAGC CCGTTTCCAT GAACGGAACT GACTGGCCTA GTCCTGCTGC AAATTTAGCA AGCGTTGAGC AACAGATAGA AAAGATCTTA GCTGCTACTG GCGTTGACGT CCCAAGGCTT CCAGCAGATG GAATCTCTGC GGCCACACTT CCCTTGCCTC TCGCTGCACT AGTCAGCCTC ACTATAACCT ACAAGCTTGA CAAAGCAACA GAGCGCTTCC TTGTACTTGT CGGACCGGCC TTAGACTCCC TTGCTGCCGC TTGCCCCTGG CCCTGCATGC CGATTGTGAC ATCGCTGTGG ACCCAGAAAG TGAAACGCTG GAGCGACTTT CTTATCTTTT CAGCCTCCAG AACTGTGTTC CACCACAACA GAGATGCTGT TATTCAGCTT CTCAGAAGCT GCTTCACTTG CACTCTTGGT CTAACACCTA CCTCCCAACT CTGCAGCTAT GGGGGAGTGG GTGCACTCCT TGGCCATGGC TTTGGCTCCC GTTACTCTGG AGGAATTTCC ACAGCTGCCC CAGGAATCTT GTACATAAAA GTGCACAGAT CGATCAGAGA TGTCATGTTC CTGACAGAAG AAATCCTCTC TCTTCTGATG TTCTCTGTGA AGAGCATTGC CACCAGGGAG CTACCAGCAG GGCAAGCAGA GAAATTGAAG AAAACGAAAG ATGGGTCGAG GTACGGGATT GGGCAGGTTT CACTTTCTTT GGCAATGAGA CGTGTCAAGC TGGCAGCTTC CCTGGGAGCC TCTCTGGTGT GGATCTCCGG TGGCCTGAAC CTGGTTCAGG CTCTGATCAA GGAGACATTA CCGTCTTGGT TCATATCGGT TCACGGAGAA GAAGATGAGT TGGGAGGTAT GATTCCGATG CTAAGAGGGT ATGCTTTAGC CTACTTTGCA ATCCTGAGCA GTGCATTTGC TTGGGGAGTG GACTCCTCAT CTCCTGCCTC AAAACGTCGG CCAAGGGTTC TGTGGCTGCA TTTGGAGTTT ATGGTGAGTG CCTTGGAAGG GAAGATATCA CTGGGCTGTG ATTGGGCGAC ATGGCAAGCA TACGTGACAG GCTTTGTGAG CCTGATGGTG CAATGCACGC CGGCTTGGGT GCTAGAGGTG GATGTAGAAG TAATAAAGAG ACTAAGCAAA AGTCTGAGGC AGTGGAACGA GCAAGACTTG GCTCTCGCTC TGCTTTGTGC CGGTGGTCTG GGGACAATGG GTGCAGCTAC TGAACTCATT GTGGAGACTT GCCATCAACA TTAGCTTTAC GTCTTTCAAC TTTCTTTTCT CGACTAATCT AAACTGTGAT TTTATTCCTC AGATTAGCTC T |
| Length | 3961 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 22100955.. 22107291 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G48110.1 |
| Description | reduced epidermal fluorescence 4 |
| TAIR curator summary | Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism. |
| Alias | [MED33B][REF4][REDUCED EPIDERMAL FLUORESCENCE 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.21954 |
Ahg470391 | Transducin family protein / WD-40 repeat family protein |
| 9.69536 |
Ahg491819 | protein kinase family protein / WD-40 repeat family protein |
| 11.5758 |
Ahg481806 | CAX interacting protein 4 |
| 11.6619 |
Ahg938922 | glucan synthase-like 11 |
| 13.1909 |
Ahg945660 | CBL-interacting protein kinase 8 |
| 14.2829 |
Ahg470259 | AAA-type ATPase family protein |
| 15.7162 |
Ahg489410 | SPOC domain / Transcription elongation factor S-II protein |
| 16.9115 |
Ahg928240 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
| 17.8885 |
Ahg330015 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
| 19.6723 |
Ahg496651 | Octicosapeptide/Phox/Bem1p family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|