Detail



ID : Ahg496671

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496671|fgenesh2_kg.8__2487__AT5G64580.1
Sequence
ACGAGGGGAA ATTTTTCTCA GCTCTAATCT GATGATTGAA CAATGACGTT TTATATCTCG AGTTCGTTAA CTCTAACCCA TTTCTCGAAA CCCTTAAACC CTTCTAATAC CCTCTTCCCC ATTCAATTTC GAGGTTCTCT GTCTAGTTTC GTTCGTCGTA GAAAACCAAC GGAAGCTAAA TTAAGCTCCA AATTCAATAT TTTTCCTTCA CGAAGAAATG GTCTGATTAC TTGTTGCAGT ACATCGAGTT TTGAGTCTAC TGAGTCTTCA GTTCCACAGG AAGAAGATGC TGAGTCCAAT CGTCTATTTG AGAGATTAAG AGAAGCTGAA AGAGAACGGC TTAGCAACAT GGAAGAGCTC GAGAGAAAGG CTAATGTACA ATTAGAAAGG CAGCTTGTTA TGGCTTCAGA TTGGAGTAGA ACATTGTTAA CCATGCGTGG CAAGTTAAAA GGAACAGAAT GGGATCCTGA AACCTCTCAC CGGATCAATT TTAGTGATTT TATGAAGCTC TTAGATTCCA ACAGTGTTCA GTACATGGAA TATTCAAATT ACGGACAGAC GATATCAGTG ATATTGCCTT ATTATAAAGA TGGGGAGCCC CAAGGAGAAG AAGAAAACTC GAAAAAGGAG ATAATTTTCC GTCGTCACAT TGTGGACCGA ATGCCAATTG ATGGTTGGAA TGATGTATGG AAGAAGTTGC ATCAGCAAAT AGTCAACGTA GAGGTTTTTA ATGTAGATGT GGTTCCAGCT GAAGTCTATA CTACAGTTGC CACTTTTGTG GTTTGGTCTA TGAGACTTGC CCTCTTTGTT TCGCTTTATG TTTGGATCGA CAGTATCACG AGGCCAATCT ATGCCAAGTT AATCCCTTGT GATCTCGGAA CCCCTACCAA AAAGATAAGG CAGCCCCTCA AGCGCCAAGC ACTCGGTTCC CTAGGCAAGA GTCGGGCAAA ATTTATATCA GCAGAGGAGA AAACTGGTGT AACTTTTGAT GATTTTGCGG GTCAGGAGTA TATAAAGAGG GAATTACAAG AAATTGTGCG AATTTTAAAG AATGATGAGG AATTTCAGAA TAAAGGCATT TATTGTCCGA AAGGTGTTCT GCTTCATGGA CCTCCCGGGA CGGGGAAAAC TCTGTTGGCC AAAGCTATTG CTGGAGAAGC TGGTTTACCT TTCTTCGCGG CAAATGGAAC CGACTTTGTT GAGATGTTTG TAGGAGTGGC TGCATCTCGT GTTAAAGATC TTTTCGCTAG CTCTCGGTCA TATGCGCCAT CTATAATCTT TATTGATGAG ATTGATGCAA TTGGAAGTAA GCGAGGTGGA CCCGATATTG GCGGGGGAGG AGCAGAGAGA GAACAAGGTT TGCTTCAAAT ATTGACTGAG ATGGATGGAT TTAAAGTTAC TACATCACAA GTATTAGTCA TAGGTGCAAC AAATAGATTA GATATCCTTG ATCCTGCTCT CTTGAGAAAA GGTCGCTTCG ACAAAATCAT AAGAGTTGGT TTACCGTCAA AAGATGGTAG ATTGGCAATA TTAAAGGTAC ATGCTAGAAA TAAATTCTTT CGATCTGAGG ATGAGAAGGA GGAGTTGCTG CAAGAAGTAG CTGAGAACAC AGAAGATTTT ACTGGAGCAG AGCTGCAAAA CGTTCTAAAT GAAGCTGGAA TCTTGACTGC TAGAAAAGAT TTAGATTACA TTGGAAGAGA AGAACTCCTA GAGGCGCTTA AGCGGCAAAA AGGGACATTT GAGACTGGAC AAGAAGATAG TACAGAAGTC CCAGAGGAAC TGAAGTTGAG ATTGGCTTAC CGAGAAGCAG CTGTTGCTGT TCTTGCTTGT TATCTCCCAG ATCAGTACCG TCCAATCAGC GAGACTGACA TAAACTCGAT CCGAAGCCAA CCAAACCTGC GTTACACTGA AACTTCAGGA AGAGTTTTTG CGAGAAAGTC TGATTATGTA AACTCAATAA TCCGTGCATG TGCTCCTAGA GTAGTTGAAG AAGAGATGTT TGGAATAGAA AACTTGTGTT GGATCTCTGC TAAGTCTACT TTAGAAGCTT CACAGCAAGC GGAATTTCTG ATTCTCCAGA CGGGAATGAC TGCTTTTGGA AAAGCTTATT ACCGAAACCA AAGAGACCTC GTTCCAAATC TTGTTCCGAA ACTTGAGGCA TTACGCGATG AATACATGCG GTTTGCTGTT GAGAAATGCT CATCAATCTT ACAAGAGTAT CAATCAGCAC TTGAAGAAAT CACAGATGTG CTTCTTGAGA AGGGAGAAAT CAAAGCCGAA GAAATTTGGA ACATTTACAA TACAGCTCCA AGGATTCCTC AAAAACCTGT GAGACCTGTC GATGAATATG GAGCTTTAAT CTATGCGGGA AGATGGGGAA TTCACGGTGT ATCACTTCCT GGAAGAGTAA CGTTTTCACC AGGAAACATC GGTTTTGCAA CATTTGGAGC TCCTCGTCCC ATGGAGACAC AAATCATTAG TGATGACACA TGGAAACTAG TGGATGAGAT TTGGGATAAA AAGGTTGAAG AAATCAAAAC AGAAGCTGTA ATTCAAGTTG AAGAAGAAAA GAAGAAACCT CAGATTTTGA TGGCAACCCA TTTCTTTTAA AACCATTTCT CAGTTTTGCC GTCTCAAGAA CATCAAAGAG ATTATTAAGT ATCCTGTAAA ACATAGAGAT CTGTAGAAAA ATGTTAGTGG AATTTTACTA ATTTATTTGA TTTTATAAAA TATTTTGTTA TTT 
Length2743
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20249231.. 20253809
Download Sequence
A.thaliana
AGI-codeAT5G64580.1
DescriptionAAA-type ATPase family protein
TAIR curator summary
Alias[EMB3144][EMBRYO DEFECTIVE 3144]
Gene coexpression
MR
MR Locus Description
3 Ahg944878 CemA-like proton extrusion protein-related
10.198 Ahg315054 acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases
13.5647 Ahg487703 P-loop containing nucleoside triphosphate hydrolases superfamily protein
18.3303 Ahg470715 translocon at the inner envelope membrane of chloroplasts 110
19.2614 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
20.3224 Ahg942753 RH39
21.3542 Ahg329352 sterol C4-methyl oxidase 1-2
23.0651 Ahg942027 Protein of unknown function (DUF3411)
25.3772 Ahg482933 pseudouridine synthase family protein
30.4959 Ahg946663 dihydrolipoyl dehydrogenases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression