Detail


ID : Ahg497012

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497012|fgenesh2_kg.8__2828__AT5G66055.2
Sequence
AATGCAGTCC CTCGCCACAC CACACACCAT CACTCTTCTT CTCCCCGGCC CCGGGACCTC TCCGTCTCGT CTTTCTCCCT CTCTTCACTC CATTGTTTTC CCCACACGAT TACGCTCTCT TTCCTATTCT TCTCAGACGT CGATCCTCCC CGATGCCGGC GATGATTTCA TCGTCGGTGA CTGTCTCGTC TACGAGGACG GCGTCTTCGA AGACCCTTAC CTTGAGACGG AGGTCACTCC GGTTGCGAAG CAGAAGAGGA ATCCGCGGGG TGGGGCCAAG AGATTAGATG AATCCGAGAT TGAACCCGAG AACCTCGTGC CGGAGGAATG GAGGGATATT CAGGCGGAGG TGAATCTGAC CAAGAAGGAC AAGCGCAAGA TAGCGCAGGA GATGGAGTTC GGGGTTCGGG TGGAGAAGAA GAGACAAGGG CTGATTCCGC TGAGGAACGT CGACTTGAAT GACTTTCTGA CGTACAAGGA AGCCAAGTTG GCTCAATTGA GGCCTGTCAC TCTCGATAAA CCGGGCAATT TCTCCGACCA TGCAGCGTCA AGCGATGGAG AGACCGCTGT ATCATCTTCC AGCGAGCGAG TGGCTCCTAA GAACCCTAGA TGGGCAGTTT ACGGCAAGGG ATTCGACCAC GTTGCCAAGT TCTTCAATAG CGACAAATAC GATCCCAGCG TCAAGAAATC CGACGGCCCT CGAAAGCTTC TTTCAAAAGA AGAAAAGTTT ATGCTCAATA GCCGGAATCC TGACCTAGCA GTTGCCACAT CAAAAAAATG GCTTCCTCTT CACACGCTGG CAGCATGTGG AGAGTTTTAT CTGGTTGATT CCTTGCTAAA GCACAATCTT GATATCAACG CAACCGACGT GGGCGGCTTG ACAGCACTTC ACCGAGCAAT CATTGGTAAA AAGCAGGCTA TTACCAACTA CCTGCTGAGG GAATCGGCAA ATCCATTTGT TCTTGATGAC GAAGGTGCGA CCTTGATGCA CTATGCTGTG CAAACAGCAT CAGCTCCCAC AATAAAACTT CTCCTACTGT ATAACGCTGA TATAAACGCT CAGGACAGGG TATGATGTCA AGCATTCATT GTAGACAACA TCATTATTGA TCAGGTGGTT GACAAATTGG GTTTTCAGGA CGGGTGGACT CCCCTGCACG TTGCAGTACA GGCCAGAAGA AGCGACGTTG TAAAGCTTCT TTTGATAAAA GGGGCGGACA TAGAAGTGAA GAACAAGGAT GGGTTAACTC CGCTTGGGCT TTGCCTCTAC CTTGGAAGAG AGACAAGGAC ATATGAGGTG ATGAAGATGT TGAAAGAGTT TCCCTGTAGC AGACACAAGA AGAGATTGAT AACAACCGAT GAAGCTATAG AATAGTCGTC TTAATTGCAG CTTGAAGCAC ACTCACTTGT GAGAAGGAGT GGGTCCAGTC TCGCACTTGC TTTAATTTGG TTTGTTGTTA ATCTTATCCA TCGGTTTAAC TGGTTTGATG TACCTTGAGC TAGAGGAGTA ATAATGTTGT TGTTTTGTTA TAATCTAAAA ACATATATAT ATATATATAT AT
Length1562
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G66055.1
Descriptionankyrin repeat protein
TAIR curator summaryA locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Alias[AKRP][EMB16][EMB2036][ankyrin repeat protein][EMBRYO DEFECTIVE 16][EMBRYO DEFECTIVE 2036]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg484044 ABC-2 type transporter family protein
5.09902 Ahg944429 LYR family of Fe/S cluster biogenesis protein
7.07107 Ahg926183 magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
7.4162 Ahg482433 Glycolipid transfer protein (GLTP) family protein
8.66025 Ahg476351 Leucine-rich receptor-like protein kinase family protein
9.48683 Ahg889026 Cytosol aminopeptidase family protein
10.8628 Ahg487264 pentatricopeptide (PPR) repeat-containing protein
16.1245 Ahg940830 elongation factor family protein
16.4317 Ahg949748 GroES-like zinc-binding alcohol dehydrogenase family protein
19.0788 Ahg474906 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression