Detail



ID : Ahg940830

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940830|scaffold_601374.1
Sequence
TCGCGGCGGA GAGAATTGAA ATGGAGCTCA GCTTGAGCAC TTCCTCCGCT TCTCCTGCGG TTTTGAGGAG ACAAGCTTCT CCTCTCCTTT ACAAGCAACA AGTGCTCGGC GTCAGCTTTG CTTCCGCGCT TAAACCAAGA GGAGGAGCTC TTCGATTTCC TTCCCGCCGT CCGCTTCCTC GTCCCATCTC TTGCTCCGCC TCTCCATCAA CCGCCGAACC TTCCTCCGAG GTGAAGAAGA AGCAGTTGGA TAGGAGGAAT GACGTGAGGA ATATAGCAAT CGTAGCACAT GTTGATCATG GCAAAACTAC TTTGGTTGAT TCTATGCTTA GGCAAGCTAA GGTTTTCCGA GATAACCAAG TCATGCAAGA GAGGATCATG GACTCAAATG ACCTTGAGCG TGAAAGAGGA ATCACTATAC TTAGCAAAAA TACCTCCATC ACTTACAAAA ACACTAAAGT AAATATTATT GATACTCCTG GCCATTCTGA CTTTGGGGGT GAAGTGGAGC GTGTCTTGAA CATGGTTGAT GGAGTGCTTC TTGTGGTGGA CTCTGTTGAG GGACCAATGC CCCAGACAAG GTTTGTTTTA AAGAAGGCTC TTGAGTTTGG ACATGCAGTT GTCGTGGTCG TTAACAAGAT TGACAGGCCT TCTGCTCGTC CTGAATTTGT TGTCAATTCC ACATTTGAAC TATTTATTGA ACTAAATGCT ACAGATGAAC AGTGTGATTT CCAAGCAATA TATGCTAGCG GGATTAAAGG AAAGGCGGGG CTTTCTCCGG ATGACCTTGC AGAAGACCTG GGACCCCTAT TCGAAGCCAT AATCAGATGT GTACCTGGGC CAAATATTGA AAAAGACGGT GCACTTCAGA TGCTTGCCAC AAATATTGAG TATGATGAGC ATAAAGGACG CATTGCTATT GGACGACTGC ACGCAGGGGT ACTGCGCAAA GGAATGGATG TCAGGGTGTG CACTTCTGAA GATTCCTGTA GATTTGCAAG AGTTAGTGAG CTTTTTGTAT ATGAGAAATT CTACAGAGTA CCTACTGATT CAGTGGAAGC TGGAGATATT TGCGCTGTAT GTGGCATAGA CAACATTCAG ATTGGGGAGA CTATTGCTGA TAAAGTACAT GGGAAGCCTC TACCTACAAT CAAAGTAGAA GAGCCAACTG TGAAAATGTC CTTCTCTGTA AACACCTCTC CATTTTCTGG TCGTGAGGGG AAGTATGTAA CGAGCAGGAA CTTACGAGAT CGCTTAAACC GTGAACTTGA GAGAAATCTA GCTATGAAAG TGGAAGATGG TGAGACAGCA GACACATTCA TTGTTAGTGG GCGTGGTACA TTACACATTA CCATCCTGAT AGAAAACATG CGAAGAGAAG GATATGAATT TATGGTTGGC CCCCCGAAAG TTATCAATAA AAGGGTTAAC GACAAATTGC TGGAGCCATA TGAGATAGCA ACTGTTGAAG TACCAGAGGC TCACATGGGG CCTGTTGTTG AACTTCTTGG CAAAAGGCGT GGACAGATGT TTGATATGCA GGGTGTTGGA TCGGAAGGAA CAACCTTTCT ACGGTACAAA ATCCCAACAC GTGGACTTCT TGGATTGAGG AACGCAATCT TAACAGCTTC TCGCGGGACA GCTATCCTTA ACACTGTATT TGACAGTTAT GGACCTTGGG CCGGTGATAT TAGCACTCGC GATCTGGGTT CGCTGGTTGC CTTTGAAGAT GGAACATCAA CATCATATGC TCTGGCGAGT GCGCAGGAGA GAGGGCAAAT GTTTGTAGGT TCAGGAGTGG ATGTATACAA AGGTCAGATA GTTGGGATCC ATCAGAGACC CGGGGACTTG GGTCTTAATA TATGCAAGAA GAAGGCAGCG ACAAACATAA GGTCCAACAA AGATGTAACA GTGATTCTTG ACACTCCCTT GACATATAGT CTGGACGACT GCATCGAATA CATTGAAGAG GATGAGTTGG TGGAGGTTAC ACCTTCAAGT ATAAGGATGT GCAAGAATCC AAAAATGGCA AAGAAAGGCA GGCAGTAAAA CCCATTTTGC AGCTGGGG 
Length2068
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5302381.. 5307006
Download Sequence
A.thaliana
AGI-codeAT5G13650.2
Descriptionelongation factor family protein
TAIR curator summary
Alias[SVR3][SUPPRESSOR OF VARIEGATION 3]
Gene coexpression
MR
MR Locus Description
1 Ahg494803 FtsH extracellular protease family
1.41421 Ahg475077 Translation elongation factor EFG/EF2 protein
3.31662 Ahg470732 fructose-2,6-bisphosphatase
5.09902 Ahg482018 FtsH extracellular protease family
5.65685 Ahg489169 photosystem II stability/assembly factor, chloroplast (HCF136)
6.16441 Ahg933344 63 kDa inner membrane family protein
6.85565 Ahg923431 CLP protease proteolytic subunit 1
7.81025 Ahg479952 ATP binding
8.06226 Ahg926404 Phosphoglucomutase/phosphomannomutase family protein
8.18535 Ahg918726 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression