Detail



ID : Ahg887315

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887315|Al_scaffold_0813_1
Sequence
ATGACCTTTG CGTCTGATTC AATGAAGCTA GTGGCAACAA GTGGAGACGG TACCCTGTCT GTCTGTAATC TTAGAACGAG TAAGGTCCAA TCTCAGTCTG AATTTTCTGA AGACGAACTA CTTTCTGTTG TTATAATGAA GAATGGCCGT AAAGTTATTT GTGGAACTCA GAATGGTACT CTCTTGTTGT ATTCATGGGG ATTTTTCAAG GATTGCAGCG ATCGGTTTGT TGATCTAGCT CCAAATTCAG TTGATACTCT ATTGAAGCTC GATGAGGACA GACTTATCAC TGGGTGTGAT AATGGAATAC TTAGCCTTGT TGGAATACTG CCCAACAGAA TCATACAGCC GATTGGGTCA CACGACTACC CTATCGAAGA TCTCGCTCTC TCGCATGATA ACAAATTTCT CGGTAGCACA GCTCATGACA GTATGCTGAA GCTGTGGAAC CTAGAAGAGA TTCTAGAAGG TTCTAATGGC AACTCGGGGA ATGCATCTGG AGCTGCAGGA GACAGTGACA GTGACAAGGA TGGGATGGAC CTTGACAATG ATTCTCACAA GTCTTCCAAA GGCAGCAAGA GGAAAACAAA AAGTAAACCG AATACGCTCA ACTCTACAAA TAATTTCTTT GCAGACTTAT AG 
Length642
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15419063.. 15420508
Download Sequence
A.thaliana
AGI-codeAT2G34260.1
Descriptiontransducin family protein / WD-40 repeat family protein
TAIR curator summary
Alias[WDR55][human WDR55 (WD40 repeat) homolog]
Gene coexpression
MR
MR Locus Description
19.4422 Ahg329936 RNA binding
28.2135 Ahg311847 GTP binding Elongation factor Tu family protein
33.8969 Ahg904629 pumilio 24
34.6987 Ahg349526 Transducin/WD40 repeat-like superfamily protein
35.2136 Ahg486432
42.9185 Ahg478388 Transducin/WD40 repeat-like superfamily protein
43.2666 Ahg472258 Pentatricopeptide repeat (PPR) superfamily protein
44.7661 Ahg474037 nucleolin like 1
50.7937 Ahg471166
53.066 Ahg907402
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression