| Annotation |
|---|
| Description | jgi|Araly1|474037|fgenesh2_kg.1__3991__AT1G48920.1 |
| Sequence |
AAATATCTTC ACGCAGCTGT CTAGGGTTTT TCGCCTCTTT CTCAACTCTC TCTCGAAAAC CTAGCAGTCG TCTCTTTCTT AGTTCTCCAT GGGCAAGTCT AAATCCGCCA CCAAAGTTGT TGCAGCTCCT GCTGCCACTA AGCCTTTGAA GAAAGGCAAG AGAGAGCCTG AGGATGATGT TGATACCAAA GTGAATCTTA AGAAGCAGAA GAAAGACGTG ATTGCTGCTG TTCAGAAGGA AAAAGCTGTG AAGAAGGTGC CTAAGAAGGT TGAGAGCTCT GACTCATCAG ACTCTGAATC TGAGGAAGAT GAGAAGGCTA AGAAAGTTCC AGCTAAGAAG GCTGCTTCAA GCAGTGAAGA TTCATCTGAT GACTCTTCCT CAGATGATGA GCCTGCACCC AAGAAGGCCG TAGCTGCTAC TAACGGAACT GTTGCTAAGA AGTCTAAGGA TGACTCATCT TCTGATGATG ATTCGTCAGA CGAGGAAGTT GCTGCAACCA AGAAGCCTGC TGCTGCTGCT GCTAAAAAGG CCAAGGCTGA GAGTTCGTCT GAAGATGATT CATCTTCTGA AGAAGAACCT GCAAAGAAAC CAGCTGCTAA GAGTGCCAAG CCGGCTGCCA AAGATTCTTC TTCCTCTGAT GAGGACTCAG ATGATGATTC TGAGGATGAG AAGCCTGCTA CCAAGAAGGC AGCTCCTGCT GCTACCAAGG CTGCAAGCAG CTCAGATTCA TCAGAAGAAG ATTCTGATGA GGAAAGTGAA GATGAGAAAC CTTCCCAGAA GAAGGCTGAT ACTAAGACTG CTAAAAAGGA GAGCAGTAGT GATGATTCTA GCGAATCTGA GGAATCTGAG AGTGAAGACG AGAAAGAAAC CCCAATGAAA AAGAGCTCTG ATGTAGAAAT GGTTGATGCT GAGAAATCAA GTGCTAAACA GCCAAAGACC CCTTCCACTC CTGCTGCTGG TGGATCAAAG ACACTCTTTG CTGCCAATCT TTCTTTCAAT ATTGAAAGAT CAGATGTCGA GAATTTCTTC AAAGAAGTTG GTGAAGTTGT TGATGTTAGA TTCTCTACCA ATAGAGATGA TGGTAGTTTC AGGGGATTTG GCCATGTTGA GTTCGCTTCT TCCGAAGAAG CACAGAAGGC GCTGGAATTC CACGGTAGGC CTTTGCTCGG TCGTGAGATT CGTCTTGATA TTGCTCAGGA GAGAGGTGAG AGAGGCGAGA GACCTGCATA CACTCCACAA AGCGGCAACT ATAAAAGTGG TGGTGATGGT GGTGATGAAA AAAAGGTTTT CGTTAAGGGA TTTGACTCTT CACTTTCTGA AGATGATATC AGGAACGCTT TGACTGAACA TTTCAGTTCA TGTGGAGAGG TGAAAACTGT ATCTGTTCCA ATGGACCGTG AAACTGGCAA CTCCAAAGGT ATTGCTTACG TCGAGTTTTC AGAAGGCAAA GAGAAGGCGT TGGAATTAAA TGGAAGTGAC ATGGGAGGAT GGAGTTTAGT AGTCGATGAG CCTAGACCGA GAGATAACAG TGGTGGTGGA TTTGGAAGGG GTAATGGTCG TTTTGGTAAC AGTGGTGGCA GAGGAAGAGA TGGAGGCCGT GGTCGTTTTG GTAACAGTGG TGGCAGGGGA AGAGATGGAG GCCGTGGTCG TTTTGGCAGT GGTGGTGGCA GGGGAAGAGA TGGTGGTCGT GGAAAACCTA GTTTTTCAGG TAAGAAGACT ACCTTCGGTG ATTTCGAGTA GAAGCTTCTG TAGAAGAAAA GTCTCTTCTT ATGTTGTTAA CTTGTGATAC TTCGCTTCCT TTTATTGTTT CGTTTCTTTT TTGTTCTAGT TACGTTTCTG TCAGAACCTT AAATTTGTCT GAATGTTAAG TTAAGCTCAA TTTTGAGTGC TTTGGGTGTT AAATCATTAT CTTCTTCTAT CATTA |
| Length | 1925 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 23909154.. 23912657 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G48920.1 |
| Description | nucleolin like 1 |
| TAIR curator summary | Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants. |
| Alias | [ATNUC-L1][NUC-L1][PARL1][nucleolin like 1][PARALLEL 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg486159 | homologue of NAP57 |
| 5.47723 |
Ahg478024 | GTP-binding family protein |
| 7.48331 |
Ahg484305 | Chaperone protein htpG family protein |
| 8 |
Ahg478926 | cobalt ion binding |
| 8.30662 |
Ahg495317 | fibrillarin 1 |
| 8.94427 |
Ahg489610 | NOP56-like pre RNA processing ribonucleoprotein |
| 9.05539 |
Ahg496177 | GTP binding Elongation factor Tu family protein |
| 9.32738 |
Ahg478388 | Transducin/WD40 repeat-like superfamily protein |
| 10.8167 |
Ahg470235 | Ribosomal protein L19e family protein |
| 11.0905 |
Ahg492297 | FK506 BINDING PROTEIN 53 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|