Detail



ID : Ahg888153

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888153|Al_scaffold_0007_139
Sequence
ATGGCTCCTC TTACTCTCTC TGTTGATGTG AAGAGCTCTT CAGCCACTTC TCCTGATGTT TCCAAGAGGG TAATGCACAG TCCACAGCTC AAAATGAGCC AAGGCTTTTT TGCATCTGTT AATACGCAAG AAGATAAACC CTTTGATTTC TTCCGCACTC TCTTTGAGGG ATTTATAGCA GGAGGTACAG CTGGAGTTGT AGTTGAAACA GCTTTATACC CAATTGATAC TATTAAGACT AGACTTCAGG CAGCTCGTGG AGGTGGGAAA ATTGTTTTGA AGGGTCTTTA TTCAGGATTA GCTGGAAATA TCGCTGGTGT CTTACCGGCT TCGGCTTTAT TTGTTGGAGT TTATGAACCC ACAAAGCAGA AACTGCTGAA GACCTTTCCT GATCATTTAA GCGCAGTTGC TCACCTGACA GCAGGGGCCA TCGGTGGACT TGCTGCCTCT CTGATTCGAG TGCCTACAGA GGTTGTGAAG CAGAGAATGC AGACCGGACA GTTTACATCA GCCCCCAATG CTGTTCGACT TATTGCATCA AAAGAGGGAT TTAGGGGTCT TTATGCAGGA TATCGGTCCT TCCTTTTGCG AGATTTGCCG TTTGATGCTA TACAGTTCTG CATATATGAG CAGCTATGCT TGGGGTATAA AAAAGCAGCG CGTAGAGACC TTAGTGATCC TGAGAACGCT CTAATCGGTG CCTTTGCTGG TGCTCTGACC GGAGCAGTCA CCACTCCGCT TGATGTTATT AAGACAAGAT TAATGGTTCA GGGATCAGCC AAACAATATC AAGGAATCGT TGACTGTGTT CAAACAATTG TAAGAGAGGA AGGAGCTCCT GCTCTCTTAA AGGGTATTGG GCCAAGAGTG TTGTGGATAG GTATTGGAGG TTCAATCTTC TTTGGTGTCC TCGAGAGCAC TAAGAGAACA CTTGCACAGA GACGTCCCAA TACGGTCAAA GAAACCAAAG AGGAATAA 
Length978
Protein Sequence
Protein Residue
Map Locationscaffold_7: 533339.. 535809
Download Sequence
A.thaliana
AGI-codeAT4G39460.1
DescriptionS-adenosylmethionine carrier 1
TAIR curator summaryEncodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.
Alias[SAMC1][SAMT1][S-adenosylmethionine carrier 1][SAM TRANSPORTER1]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg487959 overexpressor of cationic peroxidase 3
10.7238 Ahg484328 Amidase family protein
13.7477 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
15.2643 Ahg481263 MIF4G domain-containing protein / MA3 domain-containing protein
24.4949 Ahg939414 ribosome recycling factor, chloroplast precursor
27.2764 Ahg482332 Ribosomal protein S5 family protein
29.9333 Ahg937638 glutamate-1-semialdehyde 2,1-aminomutase 2
30.0998 Ahg471101 Pentatricopeptide repeat (PPR-like) superfamily protein
30.2655 Ahg929306 chloroplast 30S ribosomal protein S20, putative
32.187 Ahg488304 domains rearranged methyltransferase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression