Detail



ID : Ahg888414

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888414|Al_scaffold_0007_400
Sequence
GAAACTTGTA ATGGTATTGT TCCAGTGCTT CGGGTATTCA ATGCTACTGC TAGTTATGTT GACCAAGGAG GAGGCAAGAG AAAAGGTATA CATGTCACAA TTAACCCTTT TTTTTTTCCA TTTCAGGAGG AACACAGGGC TAGAGACTTG TTTTATGGTC TTTGGATACC AGATCTTTTC ATGGAGAGAG TCCAGACTGA TGGACAGTGG TCACTGTTTT GTTCCAATGA AGCTCCAGGT TTGGCAGATT GTTGCGGTGC AGAATTTGAG AAATTGTACA CTCAGTATGA GAATGTGGGT AAGGCTAAGA AGGTTGTCCA GGCACAACAG CAGCTTTGGT ACGAAATCTT GACATCCCAA GTAAAAACAG GAACACCATA CATGTTTTTC AAGGTAAGAA ACAAAGCAAT CAACAAAATC TGCATACCAT TAATGTCTTC CAATTTATGC ACTGAAATCG TTGAATACAC AAGTCCAGCA GAAACAGCTG TGTGTAATCT TGCATCTATT GTCTTACCCC GGTTTTGTAA GGGTGAAAGC AGAGGTCAAT ACTTAACTAC TTGGTTCATT TTGTTAACAA AGACATACTA CCATGCACTC AAGTCATCTT CAGAGATTGC TACGAAGGAA GGTGCATATG AAACTTACCA AGGAAGTCCT GGAGTTGTGC AACCTGCTAC GTGGAGTGTA ATTCCTTCGG ACCGCTGGGA CTGGGCTGCT CTCATGGATA TGATTTCAAA GAATGTAATC AGAAATTCTC TTCTAGTGGC ACTAATGCCA ACTGCTTCAA CCAGCCAGAT TCTTGGGAAC AATGAATGTT TTGAACCTTA CACCTCAAAC ATTTATAGTC GTAGAGTCTT GTGTAATAAA TTTTAA 
Length876
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1699350.. 1700393
Download Sequence
A.thaliana
AGI-codeAT2G21790.1
Descriptionribonucleotide reductase 1
TAIR curator summaryencodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair
Alias[ATRNR1][CLS8][DPD2][R1][RNR1][RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1][CRINKLY LEAVES 8][defective in pollen organelle DNA degradation 2][RIBONUCLEOTIDE REDUCTASE 1][ribonucleotide reductase 1]
Gene coexpression
MR
MR Locus Description
13.7113 Ahg940608 FAD/NAD(P)-binding oxidoreductase family protein
28.9828 Ahg347582 Transducin family protein / WD-40 repeat family protein
29.5973 Ahg476398
31.0161 Ahg951654 beta-hydroxyisobutyryl-CoA hydrolase 1
31.1448 Ahg930999 Ribosomal protein S12/S23 family protein
31.8591 Ahg482657 sequence-specific DNA binding transcription factors;DNA binding;DNA binding
34.8568 Ahg483573 beta glucosidase 17
35.4542 Ahg940935 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
40 Ahg481085 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
46.6369 Ahg951777 Pseudouridine synthase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression