Detail



ID : Ahg347582

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347582|fgenesh1_pg.C_scaffold_5000974
Sequence
ATGGATTCAG GTATCAACAC TTCTTCACAC TTCAAGCCTC AAGCTCGATG CCCACTTCAA CGAAACTTCC TCCCCAAGAA TACTTCCAAA GAAAACCCTG AAAGGTTTAT ACCAAACCGA TCAGCCATGG ATTTCGACTA TGCTCACTTC CAGCTTACGG AAGGAAGAAA CGTGAAAGAT GAGACAACAA AGGTAAGATC ATCACCATCA AGAGAAGCTT ACAGGAAGCA ATTAGCTGAG ACAATGAATC TGAATCGCAC TCGGATTCTC GCCTTTAGGA ACAAACCTCA AGCTCCGGTC CAGTTACTTC CCCGCGAGCA CTCTGTTTAT TCTCTTTACC AACAACCTAA ATCCGTAAAG CCGCGAAGAT ACATCCCTCA GAATTGCGAG AGAGCGTTGG ATGCACCTGA TATTGTGGAT GACTTTTACC TTAACTTGCT TGATTGGGGC AGTGCTAATG TTTTAGCTAT AGCTTTGGGT CGTACTGTGT ATCTATGGGA TGCTTCTAGT GGTTCTGTTT CTGAGCTTGT GACTGTTGAT GAAGATATGG GACCTGTTAC AAGTATTAAC TGGGCACAAG ATGGTCTTAA TCTCGCGGTT GGGCTTGATA ACTCTGAAGT CCAGCTTTGG GATTCTGTAG CTAGTCGTAA AGTGAGAACG TTGAAGGGTG GTCACCAGTC AAGAGTAGGA TCATTGGCGT GGAACAATCA TATCTTAACA ACGGGAGGTA TGGATGGGAA GATTATTAAC AACGATGTAC GGGTTAGATC ACACGTTGTG AAAACTTACA GGGGTCACAC TCTTGAGGTT TGTGGGTTGA AGTGGTCAGA GTCTGGACAG CATTTAGCAA GTGGTGGAAA CGACAATTTG GTTCACGTAT GGGAACATTC TACCAGGCGG TCTTTGCATA GGTTTGAGGA ACACACATCT GCGGTAAAAG CACTGGCTTG GTGCCCTTTT CAATCAGGTT TACTTGCAAC TGGTGGTGGT GGAGAAGATA GGACGATAAA GTTCTGGAAT ACTCGAACAG GAGCTTGCTT GAATTCGGTA GACACTGGCT CACAAGTTTG TTCTTTGATA TGGAGCAAGA AGGAAAGAGA GTTGCTTAGC TCACATGGGT TTACTCAGAA CCAGCTTACA CTTTGGAAGT ACCCATCCAT GGTGAAAATG GCTGAGCTCA ATGGTCATAC ATCACGCGTT CTATATATGT CACAGAGTCC GGATGGTTGT ACCGTAGCTT CAGCAGCAGG GGACGAGACT CTGAGGCTTT GGAATGTTTT TGGAGTACCA GAGGATGCTA AAAAAGCTGC TCCAAAAGCA GTTCCCCAAC CATTTTCTAA TGTAAATCGT ATTCGTTGA 
Length1359
Protein Sequence
Protein Residue
Map Locationscaffold_4: 6304274.. 6305937
Download Sequence
A.thaliana
AGI-codeAT4G33270.1
DescriptionTransducin family protein / WD-40 repeat family protein
TAIR curator summaryputative cdc20 protein (CDC20.1)
Alias[AtCDC20.1][CDC20.1][cell division cycle 20.1]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg490906
8.94427 Ahg488046 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
10.198 Ahg328389 Ubiquitin carboxyl-terminal hydrolase family protein
11.4018 Ahg475241 U2 snRNP auxilliary factor, large subunit, splicing factor
14.5602 Ahg476282 other RNA
17.5784 Ahg471543 QUASIMODO2 LIKE 1
26.8328 Ahg478704 RNA-binding (RRM/RBD/RNP motifs) family protein
28.9828 Ahg888414 ribonucleotide reductase 1
31.8119 Ahg476734
32.1714 Ahg939245 SET domain protein 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression