Detail



ID : Ahg889132

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|889132|Al_scaffold_0007_1118
Sequence
ATGCCGAAAG AGGAGAGTTC GAAAGTCACT CGAAGAAGCA CTAGGTCATC AGCTTCTGTA ACTGTTGAGA ATCCAGAACC TATTGAATCC CACCCACCAA CCATTGATGA TCTCACATTT GGGGATGAAT CAATCACTTT GGATGCTGTT CTATCTGATT TTCCTGGCAG ACGCTCTCAG ATTTTCGACT TTATTCGACT TATGGGCCCG TTGGATTGCC CTACTCTTCC AATAATGATC TATGGAGGCG CATCTACTGG AAAAACCAGT GTTGTTCTTC AGGTGCTCAG GCATCTCAAT CGCCCCTTTG TTTATTCAAG CTGTCGTACA TGTTACAATC CGCGTATCTT GTTTGAGTCG ATCCTGAATC AGTTGTTGCT ACATAGGAAA TGTTCTTCAA ACGGGTATTC TAGTGCGAAA CGATGTGACA AGCCATCTGA TTTTGTCAAC TTGGTTCGTG AAGCCCTTAG TAATGTGATA AAGACTCTCG AGTCTCCTTC CGGAACCTCA AGACTAAATA AGCCAGATGA AAAACCCATG GGGAAGATGG TGTACTTAAT ACTTGATAAT GTGGATCTTA TCAGAGACTG GGACAAAGGG AGTATGATTC TTCAGTTTCT TTTCAGTTTG GATTCTGTTT TGAAGATGCC TCAACTTGGT ATAGTACTTA TCAGCGGATT GCCACCAGAT GTGTATTACT CAAACATGGG ATACACAGAC CCTATACCTC TTCTTTTCCC TGAGTATTCT GAAGAGGATC TTCGTCAAAT TTTCTTGAGA AATCAAGCTA ACCCAAAACT GTACTCTGCA TTCCTCGACG CTGTGTTGAG ATCATTCTGT AGAGTCACCA GGAGAGTTGA GGAACTTTCC ACTACCTTCT CATCATTGTT CAGAAAGTAT TGCGAACCGC TTGATGATTT AGGGATTTCA CCTAATGAAG ACATGAAGAG AAGGCTGTAT AGTCATCTTA AACCGTTTAT AGCTCCTTGT TTAAATGATG TATTCAGGGT CTCCACTCAC CCTCATGATG GTGAAACCAG AGGCGAGAGA AGGCAGAAAG TCAGCTTCAG CTCTGAAAAC CGTGAAGAAC TTAAAATATT GGACTTCCAT ATGTCTACTT CAGCAAAGTA TCTTCTTATT GCGGCATTTC TTGCTTCGAG AAACCCAGCA ACGCTAGACG CGTCGATGTT TGACTCCACA GGAGGCATGG ATAATCGTAA AAGAAAGCGG AAGGCCTCTG AGAAATCAAT GGAAAAGAAG GAAATTGCAG AACAGGAAGC AGTCATGAAA GGACCTGGAA GCTTTCCGCT GGAAAGATTA ATGGCGATAT TCCAGTGTAT TGCCTCTGTT GGAGATTCTT CATTTGGGGA AGAGAACGAA GGAGAAGAAG AAGAAGACGC AACGGGTTAC GAAAGAGAGA ATAACAATCT GATGTCTGAT ATTCTGCTGC AAGTGTCAAG TCTTTGTGAT GCAAACTTTT TAATCAAAAG CGGAAGCTGC CCATTAGAAG GTTCTATTAG GTACCGTTCT ATGGTCTCTG AATATCTGGC TCTGAAGGTT GCGAAAAGCC TCAGCTTTCC ACTAGCCAAA TACTTGTACA GAAGATAA 
Length1608
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4747543.. 4749514
Download Sequence
A.thaliana
AGI-codeAT4G29910.1
Descriptionorigin recognition complex protein 5
TAIR curator summaryOrigin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.
Alias[ATORC5][EMB2798][ORC5][EMBRYO DEFECTIVE 2798][origin recognition complex protein 5]
Gene coexpression
MR
MR Locus Description
30.1662 Ahg472784 cytochrome B5 isoform A
32.0312 Ahg476065 Protein of unknown function (DUF155)
34.3948 Ahg486152 Glutaredoxin family protein
42.1307 Ahg952212 ribosomal protein L23AA
42.2137 Ahg932662
45.299 Ahg483730 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
48.9081 Ahg472651 NHL domain-containing protein
51.5752 Ahg915111 Ribosomal protein L13 family protein
52.6498 Ahg486978 RHO guanyl-nucleotide exchange factor 7
60.4979 Ahg944434 squalene synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression